Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RNA5SP453-201ENST00000362503 119 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RNU6-1210P-201ENST00000363775 107 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 SNORD58A-201ENST00000383875 65 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 SNORA51.9-201ENST00000384295 124 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 SNORA12-201ENST00000391162 147 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RN7SKP27-201ENST00000410684 333 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RNU6-57P-201ENST00000411348 103 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RPS29P14-201ENST00000431518 171 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 PNKDP1-201ENST00000435914 430 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 AL161651.1-201ENST00000440882 223 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 AC004223.1-201ENST00000479840 271 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RPL23AP97-201ENST00000568955 471 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 MIR3117-201ENST00000584034 78 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 RN7SL261P-201ENST00000613441 282 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 MIR6071-201ENST00000616741 78 ntBASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MS4A3Q96HJ5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 AC007496.3-201ENST00000624987 3443 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 MIR130B-202ENST00000385018 82 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 PPIAP31-201ENST00000405422 495 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 RN7SKP229-201ENST00000410465 302 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 AL096829.1-201ENST00000413677 457 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 AC098847.1-201ENST00000473094 348 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 RNU6-1098P-201ENST00000516772 96 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 IGKV3D-25-201ENST00000519599 235 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 MIR4271-201ENST00000582451 67 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 AC064859.1-201ENST00000624741 174 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 MIR3199-2-201ENST00000636243 86 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 AC012442.3-202ENST00000636742 206 ntBASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
MS4A3Q96HJ5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RNU1-22P-201ENST00000363334 158 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RNU6-975P-201ENST00000384296 105 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RNU6-748P-201ENST00000384648 107 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AL133475.1-201ENST00000404414 305 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 SNORA77.2-201ENST00000408571 112 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC009963.3-201ENST00000458090 486 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RN7SL271P-201ENST00000487601 295 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RN7SKP238-201ENST00000516483 249 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 RNU6-1231P-201ENST00000517185 103 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 Y_RNA.773-201ENST00000607168 90 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC092266.1-201ENST00000610958 165 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 AC100757.1-201ENST00000616872 1835 ntBASIC5.3□□□□□ -1.56
MS4A3Q96HJ5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
MS4A3Q96HJ5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms