Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATN1P54259 RNY3P2-201ENST00000362918 102 ntBASIC5.83□□□□□ -1.48
ATN1P54259 RPL23AP1-201ENST00000428990 471 ntBASIC5.83□□□□□ -1.48
ATN1P54259 SNRPEP9-201ENST00000436794 238 ntBASIC5.83□□□□□ -1.48
ATN1P54259 RPL34P20-201ENST00000442771 351 ntBASIC5.83□□□□□ -1.48
ATN1P54259 AURKAPS2-201ENST00000454983 333 ntBASIC5.83□□□□□ -1.48
ATN1P54259 RN7SKP260-201ENST00000516907 149 ntBASIC5.83□□□□□ -1.48
ATN1P54259 AL121603.1-201ENST00000553815 142 ntBASIC5.83□□□□□ -1.48
ATN1P54259 U4atac.1-201ENST00000618345 95 ntBASIC5.83□□□□□ -1.48
ATN1P54259 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
ATN1P54259 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATN1P54259 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ATN1P54259 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATN1P54259 ADAM3A-203ENST00000461344 2157 ntBASIC5.83□□□□□ -1.48
ATN1P54259 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATN1P54259 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATN1P54259 SMG1P7-201ENST00000565246 2704 ntBASIC5.83□□□□□ -1.48
ATN1P54259 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
ATN1P54259 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 U3.3-201ENST00000362986 216 ntBASIC5.82□□□□□ -1.48
ATN1P54259 ATP6V0E1P1-201ENST00000412537 226 ntBASIC5.82□□□□□ -1.48
ATN1P54259 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.82□□□□□ -1.48
ATN1P54259 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.82□□□□□ -1.48
ATN1P54259 SNORA31.23-201ENST00000517219 133 ntBASIC5.82□□□□□ -1.48
ATN1P54259 PARP1P2-201ENST00000556806 195 ntBASIC5.82□□□□□ -1.48
ATN1P54259 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.82□□□□□ -1.48
ATN1P54259 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATN1P54259 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATN1P54259 AC125257.1-201ENST00000560400 2930 ntBASIC5.81□□□□□ -1.48
ATN1P54259 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATN1P54259 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATN1P54259 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATN1P54259 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATN1P54259 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATN1P54259 RNU1-146P-201ENST00000364015 165 ntBASIC5.81□□□□□ -1.48
ATN1P54259 RNU1-136P-201ENST00000384181 164 ntBASIC5.81□□□□□ -1.48
ATN1P54259 AC090525.1-201ENST00000479116 478 ntBASIC5.81□□□□□ -1.48
ATN1P54259 RPL36AP21-201ENST00000490372 323 ntBASIC5.81□□□□□ -1.48
ATN1P54259 AC011406.1-201ENST00000512440 370 ntBASIC5.81□□□□□ -1.48
ATN1P54259 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.81□□□□□ -1.48
ATN1P54259 TOMM20P2-201ENST00000540082 421 ntBASIC5.81□□□□□ -1.48
ATN1P54259 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.81□□□□□ -1.48
ATN1P54259 MIR6780A-201ENST00000615089 68 ntBASIC5.81□□□□□ -1.48
ATN1P54259 MIR3529-201ENST00000637713 78 ntBASIC5.81□□□□□ -1.48
ATN1P54259 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
ATN1P54259 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATN1P54259 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.81□□□□□ -1.48
ATN1P54259 SCARNA15-201ENST00000607520 4325 ntBASIC5.81□□□□□ -1.48
ATN1P54259 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATN1P54259 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 AC083843.2-201ENST00000568248 6253 ntBASIC5.8□□□□□ -1.48
ATN1P54259 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 RNA5SP428-201ENST00000365129 132 ntBASIC5.8□□□□□ -1.48
ATN1P54259 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATN1P54259 RPL11P3-201ENST00000395256 523 ntBASIC5.8□□□□□ -1.48
ATN1P54259 MIR1182-201ENST00000408363 97 ntBASIC5.8□□□□□ -1.48
ATN1P54259 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.8□□□□□ -1.48
ATN1P54259 AC091153.1-201ENST00000466297 402 ntBASIC5.8□□□□□ -1.48
ATN1P54259 RN7SL244P-201ENST00000493405 297 ntBASIC5.8□□□□□ -1.48
ATN1P54259 RNU6-126P-201ENST00000516685 103 ntBASIC5.8□□□□□ -1.48
ATN1P54259 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 AC122688.1-201ENST00000541494 223 ntBASIC5.8□□□□□ -1.48
ATN1P54259 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 AL020997.2-201ENST00000602607 184 ntBASIC5.8□□□□□ -1.48
ATN1P54259 uc_338.4-201ENST00000616635 176 ntBASIC5.8□□□□□ -1.48
ATN1P54259 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATN1P54259 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.8□□□□□ -1.48
ATN1P54259 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATN1P54259 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATN1P54259 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.79□□□□□ -1.48
ATN1P54259 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATN1P54259 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATN1P54259 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ATN1P54259 SNORA70.2-201ENST00000364506 135 ntBASIC5.79□□□□□ -1.48
ATN1P54259 RNU6-418P-201ENST00000384035 107 ntBASIC5.79□□□□□ -1.48
ATN1P54259 Y_RNA.426-201ENST00000384068 113 ntBASIC5.79□□□□□ -1.48
ATN1P54259 RNA5SP504-201ENST00000410676 117 ntBASIC5.79□□□□□ -1.48
ATN1P54259 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.79□□□□□ -1.48
ATN1P54259 RNU7-61P-201ENST00000515897 61 ntBASIC5.79□□□□□ -1.48
ATN1P54259 MIR3921-201ENST00000577308 85 ntBASIC5.79□□□□□ -1.48
ATN1P54259 MIR4284-201ENST00000578924 81 ntBASIC5.79□□□□□ -1.48
ATN1P54259 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.79□□□□□ -1.48
ATN1P54259 AC138965.3-201ENST00000623875 498 ntBASIC5.79□□□□□ -1.48
ATN1P54259 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms