Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.37□□□□□ -1.87
PHGDHO43175 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.37□□□□□ -1.87
PHGDHO43175 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
PHGDHO43175 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.37□□□□□ -1.87
PHGDHO43175 AC024153.1-201ENST00000603103 365 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
PHGDHO43175 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHGDHO43175 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.37□□□□□ -1.87
PHGDHO43175 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
PHGDHO43175 SNORD62.1-201ENST00000362541 86 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RNU4-79P-201ENST00000362764 141 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RNU6-527P-201ENST00000363425 104 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 Y_RNA.387-201ENST00000383918 102 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 MIR767-201ENST00000390228 109 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RNU4-14P-201ENST00000410858 122 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RNU6-293P-201ENST00000411259 106 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AL030996.1-201ENST00000411430 235 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.36□□□□□ -1.87
PHGDHO43175 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
PHGDHO43175 AL049830.2-201ENST00000480072 201 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RPL23AP49-201ENST00000492925 468 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.36□□□□□ -1.87
PHGDHO43175 RNU6-559P-201ENST00000516151 98 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 RNU1-54P-201ENST00000517181 120 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 IGKV2-23-201ENST00000518729 323 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 TRMT10BP1-201ENST00000519377 943 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AC010186.2-204ENST00000537668 439 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 TRAV32-201ENST00000553993 340 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.36□□□□□ -1.87
PHGDHO43175 AC025281.1-201ENST00000567026 265 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.36□□□□□ -1.87
PHGDHO43175 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.36□□□□□ -1.87
PHGDHO43175 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AC138627.2-201ENST00000624202 601 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 AC004944.1-201ENST00000517807 3059 ntBASIC3.36□□□□□ -1.87
PHGDHO43175 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PHGDHO43175 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
PHGDHO43175 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
PHGDHO43175 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHGDHO43175 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
PHGDHO43175 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
PHGDHO43175 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
PHGDHO43175 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.35□□□□□ -1.87
PHGDHO43175 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PHGDHO43175 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.35□□□□□ -1.87
PHGDHO43175 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PHGDHO43175 Y_RNA.11-201ENST00000362375 109 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 RNU6-601P-201ENST00000384540 107 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 RNU6-325P-201ENST00000411132 105 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AL365496.1-201ENST00000426885 215 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.35□□□□□ -1.87
PHGDHO43175 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.35□□□□□ -1.87
PHGDHO43175 RNU1-95P-201ENST00000516357 160 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 RNU1-128P-201ENST00000516704 160 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 ACA59.2-201ENST00000517061 156 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.35□□□□□ -1.87
PHGDHO43175 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.35□□□□□ -1.87
PHGDHO43175 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 IMMP1LP2-201ENST00000552954 492 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AC005476.1-201ENST00000554427 397 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.35□□□□□ -1.87
PHGDHO43175 AL359757.2-201ENST00000624309 274 ntBASIC3.35□□□□□ -1.87
PHGDHO43175 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PHGDHO43175 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PHGDHO43175 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
PHGDHO43175 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PHGDHO43175 RNU4-35P-201ENST00000362588 141 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 Y_RNA.151-201ENST00000363566 112 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 Y_RNA.419-201ENST00000384041 102 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 RNU6-933P-201ENST00000384424 107 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 RNU6-306P-201ENST00000384617 107 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PHGDHO43175 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
PHGDHO43175 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.34□□□□□ -1.87
PHGDHO43175 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.34□□□□□ -1.87
PHGDHO43175 AC012308.1-201ENST00000451232 178 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AC013470.1-201ENST00000453438 462 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 Y_RNA.632-201ENST00000459189 102 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 MTCYBP40-201ENST00000509390 1135 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AC116337.1-201ENST00000509680 687 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 SNORD19.2-201ENST00000516978 73 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 RNU1-45P-201ENST00000517191 141 ntBASIC3.34□□□□□ -1.87
PHGDHO43175 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms