Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC115990.1-201ENST00000526957 301 ntBASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 AC004825.2-201ENST00000616634 455 ntBASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGC3Q9UN70 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 FAM35BP-202ENST00000497389 3337 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-834P-201ENST00000362367 110 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-899P-201ENST00000363947 107 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-44P-201ENST00000384045 107 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AL592291.1-201ENST00000403830 352 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RNA5SP113-201ENST00000410486 84 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 MTND4LP9-201ENST00000427694 174 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RPL39P29-201ENST00000447779 157 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AC091868.1-201ENST00000508746 304 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RNA5SP272-201ENST00000516095 111 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 SNRPGP20-201ENST00000604477 205 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 AL021997.2-201ENST00000615674 271 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 ADAM3A-203ENST00000461344 2157 ntBASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGC3Q9UN70 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 Y_RNA.71-201ENST00000362892 104 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 Y_RNA.329-201ENST00000365209 107 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 U3.15-201ENST00000365398 212 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-487P-201ENST00000365430 104 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 UBBP2-201ENST00000376781 231 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-578P-201ENST00000390980 103 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 AC091179.3-201ENST00000474761 144 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-971P-201ENST00000516920 106 ntBASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGC3Q9UN70 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 RNU6-818P-201ENST00000364837 108 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 RNU4-11P-201ENST00000365287 132 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 SNORA18.3-201ENST00000384122 132 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 RN7SKP100-201ENST00000411258 284 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AC096649.2-201ENST00000416186 393 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AL591473.1-201ENST00000464297 313 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 SNORA25.12-201ENST00000516202 82 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AL390726.5-202ENST00000564800 256 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 MIR4737-201ENST00000583979 81 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AL391358.1-201ENST00000605342 190 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 AL591034.3-201ENST00000605511 685 ntBASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGC3Q9UN70 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
PCDHGC3Q9UN70 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGC3Q9UN70 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGC3Q9UN70 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGC3Q9UN70 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGC3Q9UN70 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGC3Q9UN70 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms