Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 MFSD8-239ENST00000641590 2479 ntBASIC8.59□□□□□ -1.03
SENP3Q9H4L4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 SNORD32B-201ENST00000364460 84 ntBASIC8.59□□□□□ -1.03
SENP3Q9H4L4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 RNU6-205P-201ENST00000390858 107 ntBASIC8.59□□□□□ -1.03
SENP3Q9H4L4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 AC022695.1-201ENST00000522089 237 ntBASIC8.59□□□□□ -1.03
SENP3Q9H4L4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SENP3Q9H4L4 OLMALINC-203ENST00000641087 3779 ntBASIC8.59□□□□□ -1.04
SENP3Q9H4L4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
SENP3Q9H4L4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 RNU1-136P-201ENST00000384181 164 ntBASIC8.58□□□□□ -1.04
SENP3Q9H4L4 AC244636.1-201ENST00000421152 228 ntBASIC8.58□□□□□ -1.04
SENP3Q9H4L4 snoU13.4-201ENST00000458916 104 ntBASIC8.58□□□□□ -1.04
SENP3Q9H4L4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 RN7SL708P-201ENST00000580952 299 ntBASIC8.58□□□□□ -1.04
SENP3Q9H4L4 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.58□□□□□ -1.04
SENP3Q9H4L4 AC011455.2-201ENST00000599320 3336 ntBASIC8.57□□□□□ -1.04
SENP3Q9H4L4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 RNA5SP33-201ENST00000516687 98 ntBASIC8.57□□□□□ -1.04
SENP3Q9H4L4 AP004607.2-201ENST00000533949 322 ntBASIC8.57□□□□□ -1.04
SENP3Q9H4L4 HMGN2P6-201ENST00000551091 273 ntBASIC8.57□□□□□ -1.04
SENP3Q9H4L4 AC022655.2-201ENST00000577280 318 ntBASIC8.57□□□□□ -1.04
SENP3Q9H4L4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SENP3Q9H4L4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 RNA5SP46-201ENST00000362370 120 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 RNU6-442P-201ENST00000383968 104 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AL356387.2-201ENST00000422272 243 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AC091390.1-201ENST00000433904 331 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 RPL34P20-201ENST00000442771 351 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AC087499.4-201ENST00000448505 178 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 RNU7-156P-201ENST00000517214 74 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 TOMM20P2-201ENST00000540082 421 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AC009487.4-201ENST00000624969 3585 ntBASIC8.56□□□□□ -1.04
SENP3Q9H4L4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SENP3Q9H4L4 AC000403.1-201ENST00000613696 3585 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SENP3Q9H4L4 U3.32-201ENST00000408116 212 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.55□□□□□ -1.04
SENP3Q9H4L4 RPS29P28-201ENST00000446439 141 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 RPL7AP6-201ENST00000477943 801 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 PARP4P3-201ENST00000510265 317 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 SNORA31.4-201ENST00000516049 129 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 RNU6-1108P-201ENST00000516308 104 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 RNU6-1291P-201ENST00000516591 104 ntBASIC8.55□□□□□ -1.04
SENP3Q9H4L4 RNU6-1258P-201ENST00000516911 111 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms