Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC093063.1-201ENST00000599317 363 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 HLA-B-257ENST00000640094 147 ntBASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KRTAP3-3Q9BYR6 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SKP36-201ENST00000363997 312 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SKP76-201ENST00000364419 323 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 KRT18P52-201ENST00000404956 846 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORA3.1-201ENST00000408166 111 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SKP125-201ENST00000410481 302 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RNA5SP155-201ENST00000411154 129 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 GNAI2P2-201ENST00000417003 916 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL414P-201ENST00000469545 294 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL368P-201ENST00000473384 277 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 AC095057.1-201ENST00000507583 168 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU6-1194P-201ENST00000516208 104 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORA70.23-201ENST00000517218 151 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR3135A-201ENST00000578460 77 ntBASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KRTAP3-3Q9BYR6 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 MAPK10-270ENST00000641102 3538 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 U3.10-201ENST00000364459 214 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU1-16P-201ENST00000365477 164 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORD38B-201ENST00000384690 67 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 RPE-213ENST00000445268 668 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC019176.1-201ENST00000518519 225 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 CYP4A26P-201ENST00000563017 196 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL376P-201ENST00000578594 264 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR3690-201ENST00000580266 75 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC097381.3-201ENST00000608962 462 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORD38B-202ENST00000625943 69 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR4773-1-201ENST00000637203 78 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AL031595.3-201ENST00000624919 14262 ntBASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRTAP3-3Q9BYR6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms