Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 HMGN2P15-201ENST00000585707 270 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 5S_rRNA.11-201ENST00000618635 84 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 AL590808.1-201ENST00000618696 141 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 AC006435.5-201ENST00000624486 112 ntBASIC5.65□□□□□ -1.5
NUBP1P53384 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUBP1P53384 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.65□□□□□ -1.51
NUBP1P53384 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.65□□□□□ -1.51
NUBP1P53384 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NUBP1P53384 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUBP1P53384 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.65□□□□□ -1.51
NUBP1P53384 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUBP1P53384 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NUBP1P53384 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
NUBP1P53384 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
NUBP1P53384 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 snoU2_19.1-201ENST00000362361 80 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 Y_RNA.366-201ENST00000365540 102 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 SNORA12-201ENST00000391162 147 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 MIR1283-1-201ENST00000408494 87 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 VDAC1P3-201ENST00000434069 851 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.64□□□□□ -1.51
NUBP1P53384 HIGD1AP1-201ENST00000550979 275 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 MIR4284-201ENST00000578924 81 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 AC091905.4-201ENST00000623432 202 ntBASIC5.64□□□□□ -1.51
NUBP1P53384 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NUBP1P53384 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.64□□□□□ -1.51
NUBP1P53384 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NUBP1P53384 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUBP1P53384 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.64□□□□□ -1.51
NUBP1P53384 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 AC005725.1-201ENST00000577346 2607 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.63□□□□□ -1.51
NUBP1P53384 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUBP1P53384 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUBP1P53384 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NUBP1P53384 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
NUBP1P53384 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 Y_RNA.66-201ENST00000362862 102 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 Y_RNA.362-201ENST00000365518 110 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 SNORA70.9-201ENST00000384370 135 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 MIR562-201ENST00000384894 95 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 RNA5SP354-201ENST00000391247 136 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 RNA5SP129-201ENST00000410276 118 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 RNU2-32P-201ENST00000411193 191 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 GPS2P1-201ENST00000411761 986 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 AC018634.1-201ENST00000437554 401 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 RNU6-221P-201ENST00000459541 99 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 AC107297.1-201ENST00000459991 176 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.63□□□□□ -1.51
NUBP1P53384 AC134698.5-201ENST00000519444 336 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 AC068339.1-201ENST00000526965 141 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.63□□□□□ -1.51
NUBP1P53384 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC5.63□□□□□ -1.51
NUBP1P53384 AC060780.2-201ENST00000589047 198 ntBASIC5.63□□□□□ -1.51
NUBP1P53384 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUBP1P53384 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.63□□□□□ -1.51
NUBP1P53384 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUBP1P53384 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
NUBP1P53384 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.62□□□□□ -1.51
NUBP1P53384 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 RNU6-1209P-201ENST00000363655 107 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 SNORD14D-201ENST00000384390 87 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 RNU1-57P-201ENST00000384491 166 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 MIR607-201ENST00000385241 96 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 AC245291.1-201ENST00000419501 328 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.62□□□□□ -1.51
NUBP1P53384 AC138761.5-201ENST00000433967 325 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 PGBD4P5-201ENST00000445958 426 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 AC067852.5-201ENST00000589299 310 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 JPX_2.1-201ENST00000614161 69 ntBASIC5.62□□□□□ -1.51
NUBP1P53384 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUBP1P53384 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.62□□□□□ -1.51
NUBP1P53384 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NUBP1P53384 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NUBP1P53384 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms