Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.34□□□□□ -2.35
CACNA1AO00555 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.34□□□□□ -2.35
CACNA1AO00555 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.34□□□□□ -2.35
CACNA1AO00555 AC078899.2-201ENST00000595282 212 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AC004492.1-201ENST00000607036 742 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AC011155.2-201ENST00000623202 216 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AC083865.1-201ENST00000636634 831 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CACNA1AO00555 GDI2P1-201ENST00000429312 1336 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 MIR26B-201ENST00000362251 77 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 RNA5SP258-201ENST00000362750 119 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 RNU6-939P-201ENST00000384634 107 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AL356421.1-201ENST00000403255 413 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 RPS3AP24-201ENST00000407896 734 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1AO00555 EIF4EP4-201ENST00000424916 578 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.34□□□□□ -2.36
CACNA1AO00555 AC104629.2-201ENST00000468627 598 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1AO00555 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.34□□□□□ -2.36
CACNA1AO00555 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.34□□□□□ -2.36
CACNA1AO00555 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1AO00555 AC023050.3-201ENST00000541142 333 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AC011260.1-201ENST00000578420 472 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.34□□□□□ -2.36
CACNA1AO00555 AC135507.1-201ENST00000607214 561 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 AP002826.1-201ENST00000608835 315 ntBASIC0.34□□□□□ -2.36
CACNA1AO00555 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CACNA1AO00555 AC016716.1-201ENST00000265882 708 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RNU1-72P-201ENST00000362976 153 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RNU6-1328P-201ENST00000410938 106 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 OR9R1P-201ENST00000412200 877 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 BEND7P1-201ENST00000422058 457 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 NDUFB4P7-201ENST00000423198 363 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC024082.2-201ENST00000434771 238 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 TRGVB-201ENST00000453257 471 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 ANKRD26P4-201ENST00000455755 950 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC104689.1-201ENST00000473356 768 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RPS27P23-201ENST00000487608 251 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC138853.1-201ENST00000503549 823 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 AC104057.1-201ENST00000515547 497 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 SCARNA11.3-201ENST00000517276 130 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 HAUS1P3-201ENST00000523909 662 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC093023.1-201ENST00000547375 507 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.33□□□□□ -2.36
CACNA1AO00555 FAM60BP-201ENST00000578364 658 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC018638.7-201ENST00000605836 1114 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC013468.1-201ENST00000608680 598 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 U6.48-201ENST00000618523 106 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 MIR7157-201ENST00000635801 60 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RNU6-220P-201ENST00000390919 107 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.33□□□□□ -2.36
CACNA1AO00555 MTND5P8-201ENST00000449817 1083 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 PRELID3BP1-201ENST00000457142 540 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC008834.1-201ENST00000511612 175 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 OR8K4P-201ENST00000534608 872 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AL049870.4-201ENST00000555741 486 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 MIR3616-201ENST00000584070 92 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1AO00555 AC005021.1-201ENST00000608730 355 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 PART1_2.1-201ENST00000612397 250 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 LINC02211-204ENST00000642024 1070 ntBASIC0.33□□□□□ -2.36
CACNA1AO00555 RNU6-1243P-201ENST00000364028 107 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 RNA5SP125-201ENST00000364843 120 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 RNU6-98P-201ENST00000384173 107 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1AO00555 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AC006548.1-201ENST00000427470 102 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AL589880.1-201ENST00000448271 287 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 snoU13.28-201ENST00000459235 104 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 HMGB1P36-201ENST00000487709 576 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1AO00555 RNF138P1-201ENST00000502765 546 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC113398.2-201ENST00000507630 558 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 MRPS36P2-201ENST00000512569 299 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 RNU7-193P-201ENST00000516723 65 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 POLR2KP1-201ENST00000553226 168 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 MED28P6-201ENST00000558776 231 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AC007038.2-201ENST00000608095 740 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AC084824.5-201ENST00000612009 413 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 CR381572.1-201ENST00000625098 102 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 U3.13-201ENST00000364804 214 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 Y_RNA.533-201ENST00000384596 114 ntBASIC0.32□□□□□ -2.36
CACNA1AO00555 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1AO00555 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1AO00555 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1AO00555 SNORA70.16-201ENST00000516390 95 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms