Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NBPF3Q9H094 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.72□□□□□ -1.49
NBPF3Q9H094 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NBPF3Q9H094 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NBPF3Q9H094 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NBPF3Q9H094 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NBPF3Q9H094 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NBPF3Q9H094 AC005332.5-201ENST00000591222 2919 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 RNA5SP388-201ENST00000362584 119 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 RNU6-245P-201ENST00000384020 107 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 MIR34A-201ENST00000385130 110 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 RNU6-588P-201ENST00000410281 105 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 RNU6-1199P-201ENST00000411249 104 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 CYCSP10-201ENST00000417973 294 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 EIF4A1P11-201ENST00000451239 222 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 snoU109.2-201ENST00000459316 135 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC091868.1-201ENST00000508746 304 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC091874.1-201ENST00000511402 339 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 SCARNA8-201ENST00000515924 131 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 AL670379.3-201ENST00000605040 251 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC131238.1-201ENST00000617135 328 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AC091932.3-201ENST00000624223 323 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AL773545.4-201ENST00000637262 310 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AL513478.4-201ENST00000641636 310 ntBASIC5.71□□□□□ -1.5
NBPF3Q9H094 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.71□□□□□ -1.5
NBPF3Q9H094 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NBPF3Q9H094 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NBPF3Q9H094 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NBPF3Q9H094 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NBPF3Q9H094 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NBPF3Q9H094 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NBPF3Q9H094 U8.6-201ENST00000364939 135 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 RNU6-768P-201ENST00000384683 107 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 RNU6-1248P-201ENST00000391096 64 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 MIR888-201ENST00000401186 77 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 Y_RNA.595-201ENST00000410403 105 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AL160275.2-201ENST00000412010 394 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC146944.2-203ENST00000502493 354 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC139495.1-202ENST00000513164 354 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AP003327.1-201ENST00000529684 127 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.7□□□□□ -1.5
NBPF3Q9H094 CYCSP40-201ENST00000575927 294 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.7□□□□□ -1.5
NBPF3Q9H094 AL121932.1-201ENST00000605542 214 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC007390.2-201ENST00000606229 3803 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.7□□□□□ -1.5
NBPF3Q9H094 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NBPF3Q9H094 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.7□□□□□ -1.5
NBPF3Q9H094 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.7□□□□□ -1.5
NBPF3Q9H094 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NBPF3Q9H094 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.69□□□□□ -1.5
NBPF3Q9H094 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NBPF3Q9H094 AL672167.1-204ENST00000641875 3017 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-105P-201ENST00000363909 104 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 Y_RNA.251-201ENST00000364551 99 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 SNORA29-201ENST00000384183 140 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 SNORD116-21-201ENST00000384507 92 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-882P-201ENST00000391025 103 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-1275P-201ENST00000391087 107 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNA5SP44-201ENST00000410446 133 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-712P-201ENST00000410558 100 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-625P-201ENST00000459412 107 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RN7SL41P-201ENST00000476144 297 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-762P-201ENST00000517107 102 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 RNU6-58P-201ENST00000517143 103 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.69□□□□□ -1.5
NBPF3Q9H094 MIR4715-201ENST00000584117 79 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 AC004467.1-201ENST00000615678 330 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 LINC00901.1-201ENST00000617252 152 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 AC015914.2-201ENST00000618167 288 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 AL596275.2-206ENST00000641957 626 ntBASIC5.69□□□□□ -1.5
NBPF3Q9H094 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.69□□□□□ -1.5
NBPF3Q9H094 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NBPF3Q9H094 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NBPF3Q9H094 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NBPF3Q9H094 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NBPF3Q9H094 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NBPF3Q9H094 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.68□□□□□ -1.5
NBPF3Q9H094 RNU6-643P-201ENST00000384018 107 ntBASIC5.68□□□□□ -1.5
NBPF3Q9H094 RNU6-146P-201ENST00000384602 108 ntBASIC5.68□□□□□ -1.5
NBPF3Q9H094 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NBPF3Q9H094 SNORA48.7-201ENST00000391302 135 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms