Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 AC004014.2-201ENST00000623718 5122 ntBASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-328ENST00000641553 4009 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 NOL8P1-201ENST00000508336 3529 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP218-201ENST00000363188 109 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-957P-201ENST00000363652 99 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-1047P-201ENST00000364418 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms