Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 AL136981.1-203ENST00000451452 3844 ntBASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
KRTAP4-9Q9BYQ8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.28□□□□□ -2.05
KRTAP4-9Q9BYQ8 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RN7SKP160-201ENST00000363804 340 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 SNORD31B-201ENST00000364977 69 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 SNORA1.2-201ENST00000365189 134 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RNU6-1039P-201ENST00000383931 107 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MIR203A-201ENST00000384836 110 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 HMGN2P21-201ENST00000447764 270 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 HMGN2P10-201ENST00000448085 265 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RPL23AP42-201ENST00000471152 471 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RN7SL808P-201ENST00000496066 299 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AC008953.1-201ENST00000497334 318 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AC008496.1-201ENST00000509131 295 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RN7SKP46-201ENST00000515942 234 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RNA5SP271-201ENST00000516700 88 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RN7SKP11-201ENST00000517018 287 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 IGLC4-201ENST00000517690 248 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 MIR4490-201ENST00000582647 84 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AP000769.2-201ENST00000602344 396 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AC097467.4-201ENST00000605504 141 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RPSAP75-201ENST00000605848 301 ntBASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP4-9Q9BYQ8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms