Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MT-TC-201ENST00000387405 66 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AC006461.1-201ENST00000412637 326 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 RNU6-537P-201ENST00000517277 103 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AC136777.2-201ENST00000522979 358 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 UBL5P4-201ENST00000562584 236 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 MIR3646-201ENST00000578301 84 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AP002826.1-201ENST00000608835 315 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 MTND5P35-201ENST00000557537 1720 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 RNU6-235P-201ENST00000362644 107 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 RNY1P11-201ENST00000363759 113 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 MIR183-201ENST00000384958 110 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 BPY2DP-201ENST00000422208 265 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 AL627311.1-201ENST00000431514 115 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 H2AFZP5-201ENST00000446960 382 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 RNU6-772P-201ENST00000516042 105 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 DEFB117-201ENST00000602356 141 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 AL357075.2-201ENST00000614906 189 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 AL022322.2-201ENST00000624072 20397 ntBASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL25A1Q9BXS0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AC007390.2-201ENST00000606229 3803 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 MIR450A1-201ENST00000362262 91 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RNA5SP453-201ENST00000362503 119 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 Y_RNA.251-201ENST00000364551 99 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RNU6-245P-201ENST00000384020 107 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RNVU1-14-201ENST00000384770 164 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RNU6-159P-201ENST00000391080 106 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RPL7AP61-201ENST00000443410 636 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 U8.19-201ENST00000459095 133 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 SNORD33.1-201ENST00000516213 88 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AL358913.1-201ENST00000554342 121 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 MIR3121-201ENST00000579680 77 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AC002545.1-201ENST00000592511 181 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AL773545.4-201ENST00000637262 310 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AL513478.4-201ENST00000641636 310 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 AC239868.2-201ENST00000564237 4527 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
COL25A1Q9BXS0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL25A1Q9BXS0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
COL25A1Q9BXS0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL25A1Q9BXS0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL25A1Q9BXS0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-915P-201ENST00000364943 103 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 SNORA72.2-201ENST00000365028 127 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-407P-201ENST00000365280 104 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-301P-201ENST00000384277 107 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-763P-201ENST00000390865 106 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 AL354710.1-201ENST00000453641 246 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms