Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC092681.1-201ENST00000297369 291 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 RN7SKP185-201ENST00000362813 326 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 Y_RNA.243-201ENST00000364481 109 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 RNA5SP223-201ENST00000365174 120 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 RNU1-64P-201ENST00000365443 163 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 U1.1-201ENST00000384101 164 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC007161.1-204ENST00000423039 460 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 SNORD108-201ENST00000459332 71 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC083982.1-201ENST00000485679 344 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 RPS27AP10-201ENST00000496103 208 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 RNU6-168P-201ENST00000516189 101 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 SCARNA16.4-201ENST00000516956 187 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 RNU6-1073P-201ENST00000517182 106 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 IGLV3-24-201ENST00000517477 197 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC137627.1-201ENST00000545761 289 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 MIR3136-201ENST00000583498 78 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC108738.1-201ENST00000603703 237 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 uc_338.7-201ENST00000621834 124 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
USB1Q9BQ65 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
USB1Q9BQ65 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
USB1Q9BQ65 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.64
USB1Q9BQ65 NOL8P1-201ENST00000508336 3529 ntBASIC4.84□□□□□ -1.64
USB1Q9BQ65 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USB1Q9BQ65 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.64
USB1Q9BQ65 ADAM5-202ENST00000399789 1942 ntBASIC4.84□□□□□ -1.64
USB1Q9BQ65 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 RNA5SP183-201ENST00000362452 119 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 Y_RNA.294-201ENST00000364916 102 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 Y_RNA.310-201ENST00000365063 113 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 RNU6-487P-201ENST00000365430 104 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 MIR105-2-201ENST00000385083 81 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 MIR223-201ENST00000385204 110 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 RPS21P4-201ENST00000487122 248 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 RNA5SP34-201ENST00000516887 130 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 Y_RNA.757-201ENST00000578934 114 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 MIR3923-201ENST00000579521 83 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 U6.95-201ENST00000636931 70 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USB1Q9BQ65 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 AL592182.3-201ENST00000642132 3304 ntBASIC4.83□□□□□ -1.64
USB1Q9BQ65 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USB1Q9BQ65 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
USB1Q9BQ65 AC002543.1-201ENST00000299783 1954 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USB1Q9BQ65 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 MIR367-201ENST00000362299 68 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 SNORD87-201ENST00000364849 89 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 CBX3P9-201ENST00000402326 552 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 PPIAP31-201ENST00000405422 495 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 NDUFB4P6-201ENST00000436819 366 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 AL714022.1-201ENST00000439897 151 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 AIG1P1-201ENST00000503376 148 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 AC122688.1-201ENST00000541494 223 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 AC015914.2-201ENST00000618167 288 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 AC012640.5-201ENST00000623897 319 ntBASIC4.82□□□□□ -1.64
USB1Q9BQ65 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USB1Q9BQ65 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
USB1Q9BQ65 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms