Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC241585.2-209ENST00000638217 143 ntBASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SH3RF1Q7Z6J0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC021146.4-201ENST00000309229 279 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 Y_RNA.319-201ENST00000365138 92 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNU6-142P-201ENST00000384019 107 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNU1-13P-201ENST00000384499 162 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP213-201ENST00000391031 106 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RPS26P8-201ENST00000393490 348 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 MIR1290-201ENST00000408735 78 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP317-201ENST00000410176 116 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNU2-68P-201ENST00000410878 191 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP311-201ENST00000411290 116 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNU4-57P-201ENST00000515980 135 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP315-201ENST00000516340 116 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP312-201ENST00000517068 116 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RNA5SP165-201ENST00000517142 115 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC007390.2-201ENST00000606229 3803 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC006133.1-201ENST00000617106 264 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 ZNF137P-201ENST00000456718 1920 ntBASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SH3RF1Q7Z6J0 AC083843.2-201ENST00000568248 6253 ntBASIC5.15□□□□□ -1.58
SH3RF1Q7Z6J0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SH3RF1Q7Z6J0 AL136164.3-201ENST00000624429 3978 ntBASIC5.15□□□□□ -1.58
SH3RF1Q7Z6J0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.15□□□□□ -1.58
SH3RF1Q7Z6J0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SH3RF1Q7Z6J0 Y_RNA.218-201ENST00000364218 104 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-312P-201ENST00000364629 107 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 Y_RNA.571-201ENST00000384753 98 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 MIR670-201ENST00000390142 98 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AC098614.2-201ENST00000426040 255 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AL132838.2-201ENST00000492041 314 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 BTF3L4P4-201ENST00000506381 449 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-1333P-201ENST00000516162 93 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 MIR4782-201ENST00000577987 79 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 KLKP1-201ENST00000595979 403 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 IPO5P1-202ENST00000600039 287 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AL591034.3-201ENST00000605511 685 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 U6.99-201ENST00000637524 83 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 A2MP1-204ENST00000566278 4130 ntBASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SH3RF1Q7Z6J0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AL139811.1-201ENST00000424779 2299 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-961P-201ENST00000363893 105 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 MIR569-201ENST00000385228 96 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 RNA5SP372-201ENST00000390836 115 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-1001P-201ENST00000411265 100 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC016925.1-201ENST00000458303 298 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AF186996.7-201ENST00000492781 209 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-1198P-201ENST00000516904 67 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC023632.4-201ENST00000517783 191 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 RN7SL176P-201ENST00000580352 264 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 MIR3158-1-201ENST00000583596 81 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AL133393.1-201ENST00000603277 287 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 AL138963.2-201ENST00000605137 226 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SH3RF1Q7Z6J0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms