Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.97□□□□□ -1.45
CD44P16070 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.97□□□□□ -1.45
CD44P16070 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.97□□□□□ -1.45
CD44P16070 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CD44P16070 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.97□□□□□ -1.45
CD44P16070 RNU6-1138P-201ENST00000365359 106 ntBASIC5.97□□□□□ -1.45
CD44P16070 Y_RNA.545-201ENST00000384652 105 ntBASIC5.97□□□□□ -1.45
CD44P16070 RNU4-37P-201ENST00000410214 84 ntBASIC5.97□□□□□ -1.45
CD44P16070 BMS1P17-202ENST00000416720 316 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC125238.1-201ENST00000448842 249 ntBASIC5.97□□□□□ -1.45
CD44P16070 SNORD11-201ENST00000459124 84 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC092754.1-201ENST00000472975 479 ntBASIC5.97□□□□□ -1.45
CD44P16070 RN7SL132P-201ENST00000478131 296 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC108022.1-201ENST00000493466 478 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC072052.1-201ENST00000496556 306 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC105137.2-201ENST00000569073 466 ntBASIC5.97□□□□□ -1.45
CD44P16070 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.97□□□□□ -1.45
CD44P16070 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.97□□□□□ -1.45
CD44P16070 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.97□□□□□ -1.45
CD44P16070 AC006133.1-201ENST00000617106 264 ntBASIC5.97□□□□□ -1.45
CD44P16070 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.97□□□□□ -1.45
CD44P16070 CU639417.4-201ENST00000623928 207 ntBASIC5.97□□□□□ -1.45
CD44P16070 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.97□□□□□ -1.45
CD44P16070 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CD44P16070 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.97□□□□□ -1.45
CD44P16070 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CD44P16070 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CD44P16070 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.96□□□□□ -1.46
CD44P16070 SNURFL-201ENST00000309296 343 ntBASIC5.96□□□□□ -1.46
CD44P16070 RNA5SP46-201ENST00000362370 120 ntBASIC5.96□□□□□ -1.46
CD44P16070 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 RNA5SP187-201ENST00000384400 119 ntBASIC5.96□□□□□ -1.46
CD44P16070 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC5.96□□□□□ -1.46
CD44P16070 RPL32P35-201ENST00000415214 394 ntBASIC5.96□□□□□ -1.46
CD44P16070 SRSF1P1-201ENST00000424058 520 ntBASIC5.96□□□□□ -1.46
CD44P16070 OR2AH1P-201ENST00000425717 928 ntBASIC5.96□□□□□ -1.46
CD44P16070 AC027124.2-201ENST00000428249 105 ntBASIC5.96□□□□□ -1.46
CD44P16070 AC018634.1-201ENST00000437554 401 ntBASIC5.96□□□□□ -1.46
CD44P16070 REG1CP-206ENST00000447469 496 ntBASIC5.96□□□□□ -1.46
CD44P16070 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.96□□□□□ -1.46
CD44P16070 Y_RNA.659-201ENST00000515994 113 ntBASIC5.96□□□□□ -1.46
CD44P16070 SNORD46.2-201ENST00000516021 102 ntBASIC5.96□□□□□ -1.46
CD44P16070 RNU7-149P-201ENST00000516739 59 ntBASIC5.96□□□□□ -1.46
CD44P16070 MIR3923-201ENST00000579521 83 ntBASIC5.96□□□□□ -1.46
CD44P16070 MIR3163-201ENST00000581592 73 ntBASIC5.96□□□□□ -1.46
CD44P16070 MIR5006-201ENST00000583027 110 ntBASIC5.96□□□□□ -1.46
CD44P16070 MIR3136-201ENST00000583498 78 ntBASIC5.96□□□□□ -1.46
CD44P16070 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CD44P16070 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.96□□□□□ -1.46
CD44P16070 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CD44P16070 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CD44P16070 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CD44P16070 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.95□□□□□ -1.46
CD44P16070 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.95□□□□□ -1.46
CD44P16070 RNU6-1209P-201ENST00000363655 107 ntBASIC5.95□□□□□ -1.46
CD44P16070 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 SNORA67.2-201ENST00000384300 149 ntBASIC5.95□□□□□ -1.46
CD44P16070 RNU6-616P-201ENST00000384353 107 ntBASIC5.95□□□□□ -1.46
CD44P16070 MIR548B-201ENST00000385247 97 ntBASIC5.95□□□□□ -1.46
CD44P16070 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.95□□□□□ -1.46
CD44P16070 AC090602.1-201ENST00000469695 252 ntBASIC5.95□□□□□ -1.46
CD44P16070 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.95□□□□□ -1.46
CD44P16070 MIR4660-201ENST00000583549 74 ntBASIC5.95□□□□□ -1.46
CD44P16070 MIR6134-201ENST00000617606 109 ntBASIC5.95□□□□□ -1.46
CD44P16070 AC118658.2-201ENST00000618697 459 ntBASIC5.95□□□□□ -1.46
CD44P16070 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.95□□□□□ -1.46
CD44P16070 MIR548BB-201ENST00000626714 66 ntBASIC5.95□□□□□ -1.46
CD44P16070 U3.53-201ENST00000628922 216 ntBASIC5.95□□□□□ -1.46
CD44P16070 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
CD44P16070 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CD44P16070 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CD44P16070 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD44P16070 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CD44P16070 AC073136.1-201ENST00000449426 2884 ntBASIC5.94□□□□□ -1.46
CD44P16070 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.94□□□□□ -1.46
CD44P16070 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CD44P16070 Y_RNA.96-201ENST00000363092 109 ntBASIC5.94□□□□□ -1.46
CD44P16070 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CD44P16070 RNU4-69P-201ENST00000410677 143 ntBASIC5.94□□□□□ -1.46
CD44P16070 SNRPGP10-201ENST00000432323 225 ntBASIC5.94□□□□□ -1.46
CD44P16070 VDAC1P3-201ENST00000434069 851 ntBASIC5.94□□□□□ -1.46
CD44P16070 AL121890.1-201ENST00000435457 205 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms