Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 Y_RNA.714-201ENST00000517065 90 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 LCOR-201ENST00000286067 4542 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 PARP4P2-201ENST00000446672 3326 ntBASIC8.69□□□□□ -1.02
SENP3Q9H4L4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SENP3Q9H4L4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 MIR34C-201ENST00000384831 77 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 MIR541-201ENST00000401360 84 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC016909.1-201ENST00000415916 166 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 POLR2J4-204ENST00000418424 324 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AL161651.1-201ENST00000440882 223 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC233266.1-201ENST00000454518 96 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC091153.1-201ENST00000466297 402 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AL513043.2-201ENST00000573941 143 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC242852.1-201ENST00000612151 96 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC006441.5-201ENST00000612680 209 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC244015.1-201ENST00000622301 99 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 AC021613.1-201ENST00000623880 111 ntBASIC8.68□□□□□ -1.02
SENP3Q9H4L4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
SENP3Q9H4L4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 SNORA64.1-201ENST00000362600 132 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 RNU6-655P-201ENST00000362858 107 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 AC016397.1-201ENST00000412463 242 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 RN7SKP276-201ENST00000516242 268 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 AC006130.2-201ENST00000586202 326 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 AP000346.3-201ENST00000622821 210 ntBASIC8.67□□□□□ -1.02
SENP3Q9H4L4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SENP3Q9H4L4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 RNA5SP507-201ENST00000363603 121 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 Y_RNA.567-201ENST00000384736 106 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 MIR1270-201ENST00000459320 83 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 AL133162.1-201ENST00000463228 453 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 RPS23P6-201ENST00000466136 431 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 RN7SL30P-201ENST00000488416 306 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 AC091193.1-201ENST00000604640 448 ntBASIC8.66□□□□□ -1.02
SENP3Q9H4L4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SENP3Q9H4L4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AC091152.2-201ENST00000591628 2569 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 MIR126-201ENST00000362291 85 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 RNU5F-1-201ENST00000362507 117 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 Y_RNA.171-201ENST00000363760 102 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AC245884.2-201ENST00000426257 404 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AZGP1P2-201ENST00000454506 345 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 RNU1-98P-201ENST00000458992 160 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AL122020.1-201ENST00000472287 459 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AC006445.1-201ENST00000491925 405 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 SNORA58-201ENST00000505219 137 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 BNIP3P1-201ENST00000547295 580 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 MIR548AE2-201ENST00000583456 67 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AC024220.1-201ENST00000603675 484 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AC005520.4-201ENST00000604337 90 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 AL137067.2-201ENST00000621202 131 ntBASIC8.65□□□□□ -1.02
SENP3Q9H4L4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
SENP3Q9H4L4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SENP3Q9H4L4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms