Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC068647.1-201ENST00000489539 2265 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 AL360270.2-201ENST00000562952 5985 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRCH3Q96II8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 RNU6-1082P-201ENST00000364574 107 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 RNU1-140P-201ENST00000365040 165 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 RNU6-905P-201ENST00000384434 107 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 Y_RNA.584-201ENST00000391090 114 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 AL591034.1-201ENST00000407447 340 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 AC007919.1-201ENST00000429380 217 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 FTLP19-201ENST00000433300 394 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 AL354714.3-201ENST00000447284 493 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 HMGB3P8-201ENST00000449709 577 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 PRSS3P4-201ENST00000453323 162 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 AP000705.1-201ENST00000454567 350 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 SNRPGP7-201ENST00000469016 106 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 RNU6-1256P-201ENST00000516539 103 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 AL356157.2-201ENST00000605122 111 ntBASIC5.36□□□□□ -1.55
LRCH3Q96II8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRCH3Q96II8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRCH3Q96II8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC069528.2-201ENST00000624849 1991 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 RNU6-1285P-201ENST00000363480 105 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 Y_RNA.229-201ENST00000364347 113 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RNU6-728P-201ENST00000365375 104 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RNU6-793P-201ENST00000384233 104 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RNA5SP475-201ENST00000410568 110 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RPL39P29-201ENST00000447779 157 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 AL451050.1-201ENST00000450126 415 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC006026.2-201ENST00000457376 180 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 SNORA59A-201ENST00000459326 152 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RN7SL188P-201ENST00000469842 285 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RPL23AP70-201ENST00000483361 460 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC090142.3-201ENST00000519012 385 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 HSPE1P4-201ENST00000550617 308 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC004832.5-201ENST00000608677 401 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 SNX18P1Y-201ENST00000616231 511 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRCH3Q96II8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.35□□□□□ -1.55
LRCH3Q96II8 AC018555.1-201ENST00000567548 1980 ntBASIC5.35□□□□□ -1.55
LRCH3Q96II8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRCH3Q96II8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRCH3Q96II8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRCH3Q96II8 AC020633.1-201ENST00000468439 2247 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 GVINP1-202ENST00000531871 7271 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRCH3Q96II8 RNU1-13P-201ENST00000384499 162 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 RNU6-880P-201ENST00000384526 107 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 RNU6-1228P-201ENST00000391014 107 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 RPS26P8-201ENST00000393490 348 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 AL512604.1-201ENST00000404812 257 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 RNU2-68P-201ENST00000410878 191 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRCH3Q96II8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.34□□□□□ -1.55
LRCH3Q96II8 AC016831.4-201ENST00000438302 307 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.34□□□□□ -1.55
LRCH3Q96II8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.34□□□□□ -1.55
LRCH3Q96II8 RPL23AP56-201ENST00000460778 453 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 AL132838.2-201ENST00000492041 314 ntBASIC5.34□□□□□ -1.55
LRCH3Q96II8 UBE2CP3-201ENST00000502715 450 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 835.9 ms