Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AP005597.4-201ENST00000526762 229 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 MIR3941-201ENST00000582572 103 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AC022432.1-201ENST00000595739 310 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AL670379.10-201ENST00000604330 253 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AL033523.1-201ENST00000605153 153 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AL670379.9-201ENST00000605428 253 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 FAM157A-202ENST00000615155 405 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AC073476.4-201ENST00000628409 72 ntBASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.85□□□□□ -1.79
UBE3BQ7Z3V4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 MIR22-201ENST00000362190 85 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU5A-1-201ENST00000362698 116 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-288P-201ENST00000363690 104 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.534-201ENST00000384599 112 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AL360182.1-201ENST00000397433 468 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 MIR548F5-201ENST00000408421 86 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC074085.1-201ENST00000413598 418 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 HMGB1P27-201ENST00000431429 603 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 TXNP1-201ENST00000441872 371 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 VN1R17P-201ENST00000472048 1090 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 MTND5P5-201ENST00000503764 376 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU1-103P-201ENST00000516502 125 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 SCARNA13-201ENST00000516672 275 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 FRG2DP-202ENST00000566967 323 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 APOOP1-201ENST00000604695 592 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 MIR15A-201ENST00000607334 83 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC126177.8-201ENST00000618339 1015 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 AC022418.1-201ENST00000624118 445 ntBASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBE3BQ7Z3V4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
UBE3BQ7Z3V4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AC073325.2-201ENST00000339545 159 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 SNORD116-29-201ENST00000384516 83 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 MIR514A1-201ENST00000385133 98 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AL139039.1-201ENST00000401900 692 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RNA5SP293-201ENST00000410527 113 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RNU4-14P-201ENST00000410858 122 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RPS15AP6-201ENST00000420703 385 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RPL21P66-201ENST00000426566 466 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 MTND1P17-201ENST00000448961 204 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AC107399.1-201ENST00000451226 265 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RPS4XP22-201ENST00000480755 780 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RPS4XP13-201ENST00000483219 789 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-559P-201ENST00000516151 98 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AC078795.3-201ENST00000602913 472 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AC093732.2-201ENST00000607950 274 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 AL138726.1-201ENST00000614873 333 ntBASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE3BQ7Z3V4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 Y_RNA.138-201ENST00000363462 102 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RNU6-371P-201ENST00000364283 108 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 MTCO2P27-201ENST00000420740 428 ntBASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE3BQ7Z3V4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms