Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
TPM3P06753 RN7SKP284-201ENST00000411002 343 ntBASIC1.45□□□□□ -2.18
TPM3P06753 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM3P06753 MTCYBP42-201ENST00000444653 1130 ntBASIC1.45□□□□□ -2.18
TPM3P06753 ELOCP30-201ENST00000447108 299 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AC079448.1-201ENST00000449377 373 ntBASIC1.45□□□□□ -2.18
TPM3P06753 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM3P06753 AC109927.2-201ENST00000506416 303 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM3P06753 AC005832.3-201ENST00000537929 631 ntBASIC1.45□□□□□ -2.18
TPM3P06753 RRN3P3-201ENST00000549207 578 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM3P06753 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM3P06753 AC023813.2-201ENST00000564321 469 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AC104072.1-201ENST00000568817 668 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.45□□□□□ -2.18
TPM3P06753 CYP2C61P-201ENST00000604072 290 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
TPM3P06753 AC099654.9-201ENST00000637055 678 ntBASIC1.45□□□□□ -2.18
TPM3P06753 TEX21P-201ENST00000447107 1476 ntBASIC1.44□□□□□ -2.18
TPM3P06753 SNORD114-19-201ENST00000363072 75 ntBASIC1.44□□□□□ -2.18
TPM3P06753 RNU6-1164P-201ENST00000364428 107 ntBASIC1.44□□□□□ -2.18
TPM3P06753 Y_RNA.408-201ENST00000383987 102 ntBASIC1.44□□□□□ -2.18
TPM3P06753 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM3P06753 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM3P06753 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM3P06753 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM3P06753 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM3P06753 AC093249.1-201ENST00000567049 203 ntBASIC1.44□□□□□ -2.18
TPM3P06753 MIR3912-201ENST00000577566 105 ntBASIC1.44□□□□□ -2.18
TPM3P06753 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
TPM3P06753 AC098614.4-201ENST00000607601 462 ntBASIC1.44□□□□□ -2.18
TPM3P06753 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TPM3P06753 RBBP8P1-201ENST00000449447 1844 ntBASIC1.43□□□□□ -2.18
TPM3P06753 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TPM3P06753 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TPM3P06753 RNU6-661P-201ENST00000362409 107 ntBASIC1.43□□□□□ -2.18
TPM3P06753 RNU1-58P-201ENST00000362413 163 ntBASIC1.43□□□□□ -2.18
TPM3P06753 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL590084.1-201ENST00000407885 387 ntBASIC1.43□□□□□ -2.18
TPM3P06753 RNU2-36P-201ENST00000410361 191 ntBASIC1.43□□□□□ -2.18
TPM3P06753 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM3P06753 AL022400.1-201ENST00000423946 935 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL354941.1-201ENST00000438600 464 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AC104629.1-201ENST00000494226 508 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AC024589.1-201ENST00000512207 263 ntBASIC1.43□□□□□ -2.18
TPM3P06753 PTP4A1P4-201ENST00000512479 322 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AC119751.5-201ENST00000514077 770 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM3P06753 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM3P06753 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM3P06753 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.43□□□□□ -2.18
TPM3P06753 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.6-201ENST00000603753 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.11-201ENST00000604059 253 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AC008162.1-201ENST00000604718 254 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.1-201ENST00000604752 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.2-201ENST00000604983 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.5-201ENST00000605253 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.4-201ENST00000605279 254 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.12-201ENST00000605291 253 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.8-201ENST00000605353 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL670379.7-201ENST00000605823 252 ntBASIC1.43□□□□□ -2.18
TPM3P06753 RMST_6.1-201ENST00000611980 203 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL132822.1-201ENST00000617063 513 ntBASIC1.43□□□□□ -2.18
TPM3P06753 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM3P06753 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TPM3P06753 MTND3P20-201ENST00000407663 186 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RNU6-174P-201ENST00000410406 106 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RNU2-41P-201ENST00000410991 178 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RNU2-32P-201ENST00000411193 191 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM3P06753 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM3P06753 HMGB1P27-201ENST00000431429 603 ntBASIC1.42□□□□□ -2.18
TPM3P06753 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.42□□□□□ -2.18
TPM3P06753 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.42□□□□□ -2.18
TPM3P06753 PTENP1-201ENST00000447117 1215 ntBASIC1.42□□□□□ -2.18
TPM3P06753 BTF3P15-201ENST00000455606 336 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AC112492.4-201ENST00000456549 352 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
TPM3P06753 MTCYBP18-201ENST00000501056 747 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RPF2P2-201ENST00000504693 896 ntBASIC1.42□□□□□ -2.18
TPM3P06753 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM3P06753 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM3P06753 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM3P06753 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TPM3P06753 RNY4P37-201ENST00000516225 96 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RNU6-150P-201ENST00000516237 95 ntBASIC1.42□□□□□ -2.18
TPM3P06753 RNU6-334P-201ENST00000517072 102 ntBASIC1.42□□□□□ -2.18
TPM3P06753 DEFB131D-201ENST00000526803 184 ntBASIC1.42□□□□□ -2.18
TPM3P06753 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM3P06753 AC060771.1-201ENST00000582031 164 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AC073410.2-201ENST00000603240 332 ntBASIC1.42□□□□□ -2.18
TPM3P06753 AP000676.3-201ENST00000623299 569 ntBASIC1.42□□□□□ -2.18
TPM3P06753 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
TPM3P06753 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TPM3P06753 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TPM3P06753 UBE2D3P3-201ENST00000426992 425 ntBASIC1.41□□□□□ -2.18
TPM3P06753 RPL17P35-201ENST00000432217 549 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms