Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
THBS1P07996 RNA5SP249-201ENST00000516127 99 ntBASIC4.59□□□□□ -1.67
THBS1P07996 AC100767.1-201ENST00000528178 123 ntBASIC4.59□□□□□ -1.67
THBS1P07996 AC005868.1-201ENST00000536421 331 ntBASIC4.59□□□□□ -1.67
THBS1P07996 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.59□□□□□ -1.67
THBS1P07996 MIR4744-201ENST00000581563 82 ntBASIC4.59□□□□□ -1.67
THBS1P07996 U6.99-201ENST00000637524 83 ntBASIC4.59□□□□□ -1.67
THBS1P07996 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.59□□□□□ -1.67
THBS1P07996 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
THBS1P07996 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
THBS1P07996 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
THBS1P07996 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
THBS1P07996 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.58□□□□□ -1.68
THBS1P07996 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.58□□□□□ -1.68
THBS1P07996 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 U3.19-201ENST00000390893 196 ntBASIC4.58□□□□□ -1.68
THBS1P07996 RNU6-381P-201ENST00000391259 108 ntBASIC4.58□□□□□ -1.68
THBS1P07996 Z82210.1-201ENST00000440037 231 ntBASIC4.58□□□□□ -1.68
THBS1P07996 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.58□□□□□ -1.68
THBS1P07996 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.58□□□□□ -1.68
THBS1P07996 AC020593.1-201ENST00000507399 299 ntBASIC4.58□□□□□ -1.68
THBS1P07996 RN7SKP66-201ENST00000516681 231 ntBASIC4.58□□□□□ -1.68
THBS1P07996 AC022616.8-201ENST00000533569 253 ntBASIC4.58□□□□□ -1.68
THBS1P07996 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
THBS1P07996 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 MIR5571-201ENST00000577998 113 ntBASIC4.58□□□□□ -1.68
THBS1P07996 AC090616.3-201ENST00000582184 217 ntBASIC4.58□□□□□ -1.68
THBS1P07996 Mico1.1-201ENST00000611698 204 ntBASIC4.58□□□□□ -1.68
THBS1P07996 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.58□□□□□ -1.68
THBS1P07996 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
THBS1P07996 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.58□□□□□ -1.68
THBS1P07996 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.58□□□□□ -1.68
THBS1P07996 DHX9P1-201ENST00000436565 3076 ntBASIC4.58□□□□□ -1.68
THBS1P07996 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
THBS1P07996 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
THBS1P07996 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.57□□□□□ -1.68
THBS1P07996 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 ASNSP1-201ENST00000518311 1939 ntBASIC4.57□□□□□ -1.68
THBS1P07996 SNURFL-201ENST00000309296 343 ntBASIC4.57□□□□□ -1.68
THBS1P07996 RNU6-1255P-201ENST00000363434 112 ntBASIC4.57□□□□□ -1.68
THBS1P07996 Y_RNA.420-201ENST00000384043 110 ntBASIC4.57□□□□□ -1.68
THBS1P07996 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
THBS1P07996 RNU6-578P-201ENST00000390980 103 ntBASIC4.57□□□□□ -1.68
THBS1P07996 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
THBS1P07996 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
THBS1P07996 RNU6-1064P-201ENST00000410626 104 ntBASIC4.57□□□□□ -1.68
THBS1P07996 RNA5SP31-201ENST00000411144 127 ntBASIC4.57□□□□□ -1.68
THBS1P07996 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
THBS1P07996 AC112220.1-201ENST00000434628 355 ntBASIC4.57□□□□□ -1.68
THBS1P07996 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 RN7SL244P-201ENST00000493405 297 ntBASIC4.57□□□□□ -1.68
THBS1P07996 AC016632.1-201ENST00000503994 196 ntBASIC4.57□□□□□ -1.68
THBS1P07996 RNU6-155P-201ENST00000516347 100 ntBASIC4.57□□□□□ -1.68
THBS1P07996 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
THBS1P07996 MIR3145-201ENST00000580727 82 ntBASIC4.57□□□□□ -1.68
THBS1P07996 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.57□□□□□ -1.68
THBS1P07996 AC005520.5-201ENST00000613926 164 ntBASIC4.57□□□□□ -1.68
THBS1P07996 AL078604.3-201ENST00000615580 211 ntBASIC4.57□□□□□ -1.68
THBS1P07996 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.57□□□□□ -1.68
THBS1P07996 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.57□□□□□ -1.68
THBS1P07996 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 AC004925.1-201ENST00000624256 2706 ntBASIC4.57□□□□□ -1.68
THBS1P07996 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
THBS1P07996 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
THBS1P07996 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.56□□□□□ -1.68
THBS1P07996 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
THBS1P07996 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
THBS1P07996 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
THBS1P07996 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.56□□□□□ -1.68
THBS1P07996 Y_RNA.498-201ENST00000384460 102 ntBASIC4.56□□□□□ -1.68
THBS1P07996 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.56□□□□□ -1.68
THBS1P07996 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.56□□□□□ -1.68
THBS1P07996 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.56□□□□□ -1.68
THBS1P07996 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.56□□□□□ -1.68
THBS1P07996 AC010095.1-201ENST00000443543 144 ntBASIC4.56□□□□□ -1.68
THBS1P07996 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.56□□□□□ -1.68
THBS1P07996 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
THBS1P07996 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
THBS1P07996 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.56□□□□□ -1.68
THBS1P07996 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.56□□□□□ -1.68
THBS1P07996 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.56□□□□□ -1.68
THBS1P07996 AC133555.2-201ENST00000550213 292 ntBASIC4.56□□□□□ -1.68
THBS1P07996 CYCSP40-201ENST00000575927 294 ntBASIC4.56□□□□□ -1.68
THBS1P07996 MIR4679-2-201ENST00000578358 77 ntBASIC4.56□□□□□ -1.68
THBS1P07996 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.56□□□□□ -1.68
THBS1P07996 AP002826.1-201ENST00000608835 315 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms