Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC017099.1-201ENST00000448261 1028 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.08□□□□□ -2.24
PDE6DO43924 SSXP1-201ENST00000453640 473 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 AC104629.1-201ENST00000494226 508 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.08□□□□□ -2.24
PDE6DO43924 SNORA31.24-201ENST00000517232 57 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.08□□□□□ -2.24
PDE6DO43924 AL133153.1-201ENST00000557756 303 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.08□□□□□ -2.24
PDE6DO43924 AC069545.1-201ENST00000605671 358 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.08□□□□□ -2.24
PDE6DO43924 AC231657.1-201ENST00000624313 397 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.08□□□□□ -2.24
PDE6DO43924 AP005901.5-201ENST00000545779 1796 ntBASIC1.08□□□□□ -2.24
PDE6DO43924 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDE6DO43924 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDE6DO43924 RNU6-744P-201ENST00000365557 107 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PDE6DO43924 RNU6-1316P-201ENST00000384242 108 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 RNU6-253P-201ENST00000384730 105 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.07□□□□□ -2.24
PDE6DO43924 AL354695.1-201ENST00000427935 228 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.07□□□□□ -2.24
PDE6DO43924 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 HMGB1P27-201ENST00000431429 603 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.07□□□□□ -2.24
PDE6DO43924 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 ELOCP30-201ENST00000447108 299 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.07□□□□□ -2.24
PDE6DO43924 AC079448.1-201ENST00000449377 373 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AL353718.1-201ENST00000451028 517 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 BTF3P15-201ENST00000455606 336 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.07□□□□□ -2.24
PDE6DO43924 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 RNU2-53P-201ENST00000516257 147 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.07□□□□□ -2.24
PDE6DO43924 AP001542.1-201ENST00000591314 200 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 WISP1-OT1-201ENST00000602893 642 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AC098483.2-201ENST00000603158 454 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 BX323046.1-201ENST00000610145 535 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 AL133445.2-201ENST00000611191 527 ntBASIC1.07□□□□□ -2.24
PDE6DO43924 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
PDE6DO43924 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.07□□□□□ -2.24
PDE6DO43924 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDE6DO43924 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
PDE6DO43924 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PDE6DO43924 RNU6-1274P-201ENST00000384557 107 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 MIR23B-201ENST00000384832 97 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.06□□□□□ -2.24
PDE6DO43924 AL513185.2-201ENST00000425543 193 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.06□□□□□ -2.24
PDE6DO43924 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PDE6DO43924 AC245517.4-201ENST00000448601 281 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.06□□□□□ -2.24
PDE6DO43924 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.06□□□□□ -2.24
PDE6DO43924 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.06□□□□□ -2.24
PDE6DO43924 AC025465.3-201ENST00000510570 311 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 RNU6-572P-201ENST00000516724 80 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AC009902.1-201ENST00000519351 183 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PDE6DO43924 AC022616.8-201ENST00000533569 253 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.06□□□□□ -2.24
PDE6DO43924 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 MTATP6P25-201ENST00000574491 261 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 VN1R87P-201ENST00000596706 487 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AC004908.3-201ENST00000610248 625 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AC078880.5-201ENST00000617845 421 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.06□□□□□ -2.24
PDE6DO43924 AC093875.1-201ENST00000623688 504 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 AC090517.3-201ENST00000625170 141 ntBASIC1.06□□□□□ -2.24
PDE6DO43924 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.05□□□□□ -2.24
PDE6DO43924 RNU6-288P-201ENST00000363690 104 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RNU6-609P-201ENST00000365459 107 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 MIR186-201ENST00000384988 86 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 FTH1P15-201ENST00000406984 280 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RN7SKP192-201ENST00000411291 327 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.05□□□□□ -2.24
PDE6DO43924 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.05□□□□□ -2.24
PDE6DO43924 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.05□□□□□ -2.24
PDE6DO43924 RSL24D1P8-201ENST00000434442 492 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 AC007677.1-201ENST00000445757 515 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.05□□□□□ -2.24
PDE6DO43924 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.05□□□□□ -2.24
PDE6DO43924 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.05□□□□□ -2.24
PDE6DO43924 AC132942.1-201ENST00000486753 483 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RPF2P2-201ENST00000504693 896 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RNVU1-2-201ENST00000516326 135 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 AC109329.1-201ENST00000518744 317 ntBASIC1.05□□□□□ -2.24
PDE6DO43924 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.05□□□□□ -2.24
PDE6DO43924 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.05□□□□□ -2.24
PDE6DO43924 SNORD53B-201ENST00000577887 78 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms