Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 AL021997.2-201ENST00000615674 271 ntBASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.79□□□□□ -1.48
MS4A4AQ96JQ5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 U8.1-201ENST00000362843 134 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 RNU6-487P-201ENST00000365430 104 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 Y_RNA.558-201ENST00000384685 113 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 MIR1193-201ENST00000408109 78 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 RNY4P29-201ENST00000410801 97 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 AL691449.1-201ENST00000426570 421 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 ENPP7P9-201ENST00000514456 627 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 MIR1254-2-201ENST00000579553 63 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 AL020997.2-201ENST00000602607 184 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 Z82209.1-201ENST00000422141 2135 ntBASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.78□□□□□ -1.48
MS4A4AQ96JQ5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
MS4A4AQ96JQ5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC239868.2-201ENST00000564237 4527 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AP001642.1-201ENST00000624727 2117 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AL590240.1-201ENST00000334118 313 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-335P-201ENST00000364563 113 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 MIR129-1-201ENST00000384972 72 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 EI24P2-201ENST00000397776 1076 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC099548.1-201ENST00000421443 426 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 snoU13.4-201ENST00000458916 104 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 RPL7AP28-201ENST00000464513 571 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC103975.1-201ENST00000482506 483 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 SCARNA22-201ENST00000503991 125 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 SNORA31.8-201ENST00000516327 108 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AP003327.1-201ENST00000529684 127 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC025281.1-201ENST00000567026 265 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 MIR3923-201ENST00000579521 83 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC068205.3-201ENST00000636385 468 ntBASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.77□□□□□ -1.49
MS4A4AQ96JQ5 AC002543.1-201ENST00000299783 1954 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 SNORD113.2-201ENST00000364166 89 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-1164P-201ENST00000364428 107 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 SNORA48.5-201ENST00000391143 135 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 MLLT10P1-201ENST00000418346 262 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AC009238.2-201ENST00000431026 355 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 HSPE1P21-201ENST00000438283 308 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AC000111.2-201ENST00000448200 210 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AC090897.2-201ENST00000581715 130 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AC091178.2-201ENST00000584401 117 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 ARF4P1-201ENST00000605447 541 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 SNORD98-201ENST00000636377 67 ntBASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A4AQ96JQ5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms