Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HSPD1P21-201ENST00000436541 245 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 U8.22-201ENST00000459141 133 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 MRPL42P6-201ENST00000486397 371 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 RNU6-1315P-201ENST00000517187 99 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 MIR4659A-201ENST00000580269 81 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 AC034102.8-201ENST00000615146 484 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 AC005086.4-201ENST00000623065 213 ntBASIC7.38□□□□□ -1.23
TRIM41Q8WV44 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM41Q8WV44 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RNA5SP307-201ENST00000362863 116 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RNU6-512P-201ENST00000364438 103 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 Y_RNA.292-201ENST00000364904 97 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 SNORD96B-201ENST00000386148 79 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 SNORA74C-2-201ENST00000411179 201 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RPL23AP81-201ENST00000455252 467 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RPL35AP15-201ENST00000468042 339 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RN7SL691P-201ENST00000494487 301 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RPL7P47-201ENST00000497299 556 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 AK3P2-201ENST00000507976 429 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 Y_RNA.679-201ENST00000516416 91 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 HMGB1P14-201ENST00000557424 591 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM41Q8WV44 LDHAL6CP-202ENST00000550738 3224 ntBASIC7.37□□□□□ -1.23
TRIM41Q8WV44 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 RNU6-1290P-201ENST00000362957 109 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 U3.6-201ENST00000363622 211 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 RNY4P28-201ENST00000365281 93 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 SNORD50.2-201ENST00000365465 70 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 RNU6-81P-201ENST00000365608 104 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 SNORD78.2-201ENST00000391076 69 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 SNORD56-201ENST00000413522 71 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC087477.1-201ENST00000465747 340 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 RNU6-612P-201ENST00000516909 102 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AL157871.3-201ENST00000557231 293 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 TVP23BP1-201ENST00000557500 617 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 MIR3144-201ENST00000579460 79 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AL162424.1-201ENST00000602325 221 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AC007546.2-201ENST00000623996 360 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 BX322639.1-202ENST00000423987 2213 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM41Q8WV44 AL031595.2-201ENST00000624215 19071 ntBASIC7.36□□□□□ -1.23
TRIM41Q8WV44 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 Y_RNA.383-201ENST00000383855 97 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RNU6-712P-201ENST00000410558 100 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RNU2-51P-201ENST00000410708 197 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RPL19P1-201ENST00000411635 428 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 HSPE1P25-201ENST00000455484 251 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RNU7-175P-201ENST00000515915 61 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RN7SKP272-201ENST00000516988 232 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 RPL23AP78-201ENST00000599928 470 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 AC037487.3-201ENST00000606668 112 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 AC005332.5-201ENST00000591222 2919 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 PHKBP1-201ENST00000450951 1951 ntBASIC7.35□□□□□ -1.23
TRIM41Q8WV44 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC7.35□□□□□ -1.23
TRIM41Q8WV44 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM41Q8WV44 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM41Q8WV44 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM41Q8WV44 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM41Q8WV44 AP000542.2-201ENST00000623199 6179 ntBASIC7.34□□□□□ -1.23
TRIM41Q8WV44 RNU6-1249P-201ENST00000363237 111 ntBASIC7.34□□□□□ -1.23
TRIM41Q8WV44 RNU6-926P-201ENST00000384075 107 ntBASIC7.34□□□□□ -1.23
TRIM41Q8WV44 MIR301A-201ENST00000385261 86 ntBASIC7.34□□□□□ -1.23
TRIM41Q8WV44 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms