Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU6-6P-201ENST00000606623 107 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 LINC02555-201ENST00000563933 1951 ntBASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
COL13A1Q5TAT6 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AC009643.2-201ENST00000603543 1448 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RNU6-1074P-201ENST00000383995 104 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.464-201ENST00000384282 110 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RNU6-378P-201ENST00000384324 107 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 SNORA19-201ENST00000384737 128 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RPS29P13-201ENST00000402041 169 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL603910.2-201ENST00000407268 136 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RNU6-1025P-201ENST00000410629 104 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RN7SL271P-201ENST00000487601 295 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 RPL21P13-201ENST00000488305 481 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AC093023.1-201ENST00000547375 507 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 BPIFA4P-203ENST00000603168 689 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL161798.1-201ENST00000604630 131 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 MIR376A1-201ENST00000616574 68 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 AL365440.1-201ENST00000436135 2167 ntBASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL13A1Q5TAT6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL139811.1-201ENST00000424779 2299 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.150-201ENST00000363562 102 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 SNORA80A-201ENST00000363922 136 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.200-201ENST00000364018 102 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.274-201ENST00000364714 101 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RNU6-384P-201ENST00000364900 104 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RNU6-827P-201ENST00000365553 106 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RNU6-708P-201ENST00000384217 107 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 MIR190B-201ENST00000401119 79 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 SNORA3C-201ENST00000408792 125 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RNU2-33P-201ENST00000410344 192 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 MTATP6P29-201ENST00000415057 132 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL117339.3-201ENST00000418733 162 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL445305.1-201ENST00000432577 575 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 RPL7AP61-201ENST00000443410 636 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 ATP5F1P5-201ENST00000526403 760 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AC104581.2-201ENST00000572227 430 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AC006023.1-201ENST00000603944 259 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AC010900.2-201ENST00000604508 210 ntBASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.81□□□□□ -1.64
COL13A1Q5TAT6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 AC006971.1-201ENST00000407916 4486 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 AL450345.1-202ENST00000605741 3881 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.65-201ENST00000362846 100 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 SNORD50.1-201ENST00000362987 71 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 snoU2_19.2-201ENST00000363024 80 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 SNORA38.1-201ENST00000364172 131 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 RNU6-173P-201ENST00000364215 104 ntBASIC4.8□□□□□ -1.64
COL13A1Q5TAT6 Y_RNA.238-201ENST00000364441 102 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms