Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 SNORD114-7-201ENST00000362520 77 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RNY1P10-201ENST00000363268 113 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 SNORA63.5-201ENST00000363548 123 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RNU6-674P-201ENST00000363831 107 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RNU4-41P-201ENST00000364426 143 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 AL590004.2-201ENST00000404787 371 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RNU2-70P-201ENST00000410718 179 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 RPL23AP1-201ENST00000428990 471 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 ATP5EP1-201ENST00000510257 156 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 SNORA18.4-201ENST00000516440 124 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 AC005562.2-201ENST00000618264 111 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 AL035470.1-201ENST00000622571 220 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 AC018692.3-201ENST00000623929 123 ntBASIC4.67□□□□□ -1.66
RNF223E7ERA6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RNF223E7ERA6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF223E7ERA6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC126323.6-202ENST00000568092 3511 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC092070.2-203ENST00000598377 3644 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 U3.8-201ENST00000363675 217 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNA5SP335-201ENST00000363817 110 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU1-59P-201ENST00000364829 162 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU6-1134P-201ENST00000365156 101 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU6-487P-201ENST00000365430 104 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU6-622P-201ENST00000384272 103 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 MIR551A-201ENST00000385042 96 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU2-32P-201ENST00000411193 191 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AL358232.1-201ENST00000448030 501 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC010531.2-201ENST00000465012 153 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 COX6CP6-201ENST00000490840 228 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AIG1P1-201ENST00000503376 148 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 RNU7-116P-201ENST00000516940 62 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC026421.1-201ENST00000519101 163 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AP004371.1-201ENST00000525240 214 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 MTND6P33-201ENST00000571794 183 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC097639.2-201ENST00000603159 172 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 MIR3202-2-201ENST00000635980 79 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RNF223E7ERA6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC005332.5-201ENST00000591222 2919 ntBASIC4.66□□□□□ -1.66
RNF223E7ERA6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF223E7ERA6 AC083843.2-201ENST00000568248 6253 ntBASIC4.65□□□□□ -1.66
RNF223E7ERA6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RNF223E7ERA6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF223E7ERA6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
RNF223E7ERA6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF223E7ERA6 RNU1-75P-201ENST00000347264 129 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 RNA5SP515-201ENST00000364570 118 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 DYNLT3P1-201ENST00000378574 347 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 RNU1-106P-201ENST00000384382 164 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 MIR624-201ENST00000385217 97 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 MIR130A-201ENST00000385274 89 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AF228730.3-201ENST00000436691 102 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AC006466.1-201ENST00000438721 289 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 RN7SL132P-201ENST00000478131 296 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 SRIP1-201ENST00000489235 288 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 RPL23AP54-201ENST00000495129 419 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AC108145.1-201ENST00000503770 153 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF223E7ERA6 AP000769.2-201ENST00000602344 396 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AL049861.1-201ENST00000603130 150 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF223E7ERA6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF223E7ERA6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF223E7ERA6 AC002543.1-201ENST00000299783 1954 ntBASIC4.65□□□□□ -1.67
RNF223E7ERA6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF223E7ERA6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms