Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 AC026951.1-201ENST00000559530 2459 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 SNORD45.3-201ENST00000363836 72 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 MIRLET7F2-201ENST00000385277 83 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 SPTLC1P2-201ENST00000407089 121 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 BMS1P17-202ENST00000416720 316 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AC004386.2-201ENST00000441858 148 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AC023141.8-201ENST00000442554 208 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 HMGN2P32-201ENST00000444648 269 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AC009237.8-201ENST00000445492 379 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 TDGF1P1-201ENST00000445734 527 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AURKAPS2-201ENST00000454983 333 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR4700-201ENST00000578311 74 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 AC025166.1-201ENST00000612411 163 ntBASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGA4Q9Y5G9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 SNORA26.3-201ENST00000391119 136 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 Y_RNA.622-201ENST00000411091 108 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 RPS3AP1-201ENST00000413190 320 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 RPS11P7-201ENST00000442125 465 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-703P-201ENST00000516946 107 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 AC006115.2-201ENST00000596823 202 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 AC025946.2-201ENST00000603398 234 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA4Q9Y5G9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AL592182.3-201ENST00000642132 3304 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AC000123.3-201ENST00000624029 4975 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 Y_RNA.281-201ENST00000364774 94 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 SNORD18B-201ENST00000365659 72 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-756P-201ENST00000383997 107 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-136P-201ENST00000384663 107 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR1290-201ENST00000408735 78 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 BX510359.5-201ENST00000515651 304 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 CR383656.8-201ENST00000549046 145 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR1269B-201ENST00000580405 75 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RPL30P11-203ENST00000598995 310 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RN7SL544P-201ENST00000617232 284 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AC118658.2-201ENST00000618697 459 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 RN7SL763P-201ENST00000620922 284 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 C4BPAP1-201ENST00000415474 1893 ntBASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA4Q9Y5G9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms