Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TMSB4XP3-201ENST00000445144 114 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 TOMM22P6-201ENST00000465035 409 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC146944.2-203ENST00000502493 354 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC139495.1-202ENST00000513164 354 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 Vault.1-201ENST00000516474 102 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC010186.2-204ENST00000537668 439 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 RN7SL703P-201ENST00000578485 302 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC011476.5-201ENST00000615594 130 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC140479.6-201ENST00000633535 357 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 AL133412.1-201ENST00000380194 2992 ntBASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-102P-201ENST00000384485 104 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 COX6CP10-201ENST00000416832 224 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 U8.22-201ENST00000459141 133 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AL591473.1-201ENST00000464297 313 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AC026726.1-201ENST00000512859 601 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-1278P-201ENST00000516130 107 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-1212P-201ENST00000517023 104 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AC069200.1-201ENST00000609511 323 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 MIR6867-201ENST00000610636 67 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AC240442.1-201ENST00000616055 283 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AL360181.4-201ENST00000621752 134 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 AC097372.5-201ENST00000623665 376 ntBASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ZC3H4Q9UPT8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-173P-201ENST00000364215 104 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 SNORD78.2-201ENST00000391076 69 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 AL033519.2-201ENST00000403958 392 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 Y_RNA.623-201ENST00000411128 95 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 RPL21P40-201ENST00000428586 483 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 ANXA2P1-201ENST00000505539 926 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 HMGB3P16-201ENST00000508037 287 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 AC023141.12-201ENST00000512399 199 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 AC104581.2-201ENST00000572227 430 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 MIR548AI-201ENST00000579940 88 ntBASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-858P-201ENST00000362436 107 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-227P-201ENST00000362865 103 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR514A1-201ENST00000385133 98 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-861P-201ENST00000516745 106 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR2355-201ENST00000517199 87 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC109479.2-201ENST00000517842 174 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR4659A-201ENST00000580269 81 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 BRDTP1-201ENST00000605735 677 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RNU6-290P-201ENST00000365212 101 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 MIR7-3-201ENST00000384898 110 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RN7SKP177-201ENST00000410567 355 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RPL36AP10-201ENST00000421785 322 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 YME1L1P1-201ENST00000429435 297 ntBASIC5.48□□□□□ -1.53
ZC3H4Q9UPT8 RPL35AP21-201ENST00000437667 333 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms