Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-957P-201ENST00000363652 99 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR197-201ENST00000384976 75 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-930P-201ENST00000390938 100 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP203-201ENST00000410451 136 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AL356121.1-201ENST00000442911 156 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SNORA59A-201ENST00000459326 152 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AP000873.1-201ENST00000463987 400 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RPL32P34-201ENST00000486380 400 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 YPEL5P3-201ENST00000547227 352 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL192P-201ENST00000584303 299 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AC005000.2-201ENST00000605468 310 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AF117829.1-206ENST00000621883 3802 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AP000648.3-201ENST00000623539 4507 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ITPK1-AS1-201ENST00000553639 4701 ntBASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KRTAP3-3Q9BYR6 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 AL161901.1-201ENST00000624954 3425 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR345-201ENST00000362114 98 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-654P-201ENST00000364373 107 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 Y_RNA.239-201ENST00000364444 113 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 SNORD28B-201ENST00000390993 75 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RPS27P16-201ENST00000425758 201 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 AL157831.1-201ENST00000426134 473 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RPL23AP83-201ENST00000434984 473 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL861P-201ENST00000473793 285 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL282P-201ENST00000479676 297 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-982P-201ENST00000516216 102 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6ATAC14P-201ENST00000516218 91 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 AC138749.4-201ENST00000563970 127 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 AC141846.1-201ENST00000568348 142 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR548AR-201ENST00000582191 57 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
KRTAP3-3Q9BYR6 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms