Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL15A1P39059 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL15A1P39059 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL15A1P39059 SNORA72.1-201ENST00000363485 129 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 Y_RNA.303-201ENST00000364998 94 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 RNU6-61P-201ENST00000365528 109 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL15A1P39059 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL15A1P39059 RN7SKP140-201ENST00000411196 284 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AC138393.2-201ENST00000414742 246 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.71□□□□□ -1.82
COL15A1P39059 RPL30P16-201ENST00000419341 429 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 HMGB1P27-201ENST00000431429 603 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.71□□□□□ -1.82
COL15A1P39059 AC073415.1-201ENST00000449240 153 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.71□□□□□ -1.82
COL15A1P39059 RPS20P20-201ENST00000460498 340 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL15A1P39059 AL359273.1-201ENST00000510918 627 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.71□□□□□ -1.82
COL15A1P39059 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.71□□□□□ -1.82
COL15A1P39059 AC107016.2-201ENST00000547968 190 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.71□□□□□ -1.82
COL15A1P39059 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
COL15A1P39059 AC024619.4-201ENST00000580924 316 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AL035413.2-201ENST00000604801 525 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 AL158032.1-201ENST00000605401 106 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 uc_338.11-201ENST00000619132 160 ntBASIC3.71□□□□□ -1.82
COL15A1P39059 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.71□□□□□ -1.82
COL15A1P39059 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.7□□□□□ -1.82
COL15A1P39059 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.7□□□□□ -1.82
COL15A1P39059 RNA5SP118-201ENST00000410385 109 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 RNU2-29P-201ENST00000410423 189 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 RNU6-373P-201ENST00000411247 98 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 RNU6-387P-201ENST00000411331 105 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.7□□□□□ -1.82
COL15A1P39059 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.7□□□□□ -1.82
COL15A1P39059 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.7□□□□□ -1.82
COL15A1P39059 AC020550.1-201ENST00000447385 163 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 NIPA2P5-201ENST00000452282 464 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AL162395.1-201ENST00000457882 422 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.7□□□□□ -1.82
COL15A1P39059 RPS29P25-201ENST00000481709 171 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 EIF4EP3-201ENST00000498782 656 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 HMGB3P15-201ENST00000507326 574 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL15A1P39059 AC104806.1-201ENST00000508720 308 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 SNORA31.8-201ENST00000516327 108 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AP006587.4-201ENST00000526053 529 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 RANP3-201ENST00000530970 276 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 OR5B19P-201ENST00000531766 928 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.7□□□□□ -1.82
COL15A1P39059 MIR4703-201ENST00000577728 79 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AC005730.3-201ENST00000583067 366 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL15A1P39059 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.7□□□□□ -1.82
COL15A1P39059 SDAD1P2-201ENST00000441308 2028 ntBASIC3.7□□□□□ -1.82
COL15A1P39059 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.69□□□□□ -1.82
COL15A1P39059 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL15A1P39059 Y_RNA.160-201ENST00000363677 92 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 SNORD115-7-201ENST00000365306 82 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 Y_RNA.576-201ENST00000384781 102 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.69□□□□□ -1.82
COL15A1P39059 AL356776.1-201ENST00000406574 447 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AL606923.1-201ENST00000406616 190 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 OR6C66P-201ENST00000414917 930 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 NEK4P1-201ENST00000433383 879 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 MTND4P25-201ENST00000441039 533 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 RNU6-953P-201ENST00000459154 107 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 RN7SKP219-201ENST00000516825 296 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 RNU6-677P-201ENST00000516914 101 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 RN7SKP258-201ENST00000517151 304 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL15A1P39059 ADI1P3-201ENST00000549509 470 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 BNIP3P30-201ENST00000601184 574 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AL670379.4-201ENST00000605279 254 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 RMST_3.1-201ENST00000611651 109 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AC063943.3-201ENST00000615562 356 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AC011155.2-201ENST00000623202 216 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.69□□□□□ -1.82
COL15A1P39059 OR4G2P-202ENST00000641004 1759 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL15A1P39059 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL15A1P39059 ASNSP3-201ENST00000451989 1306 ntBASIC3.69□□□□□ -1.82
COL15A1P39059 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.68□□□□□ -1.82
COL15A1P39059 OR4G1P-203ENST00000641984 1631 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 RNU6-552P-201ENST00000362869 119 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 U3.12-201ENST00000364498 214 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 RNU6-190P-201ENST00000384154 102 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 RNU6-328P-201ENST00000390887 106 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.68□□□□□ -1.82
COL15A1P39059 CALM2P2-201ENST00000428512 440 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.68□□□□□ -1.82
COL15A1P39059 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.68□□□□□ -1.82
COL15A1P39059 MTND5P20-201ENST00000448677 143 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 AC125238.1-201ENST00000448842 249 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.68□□□□□ -1.82
COL15A1P39059 SNRPFP3-201ENST00000457792 225 ntBASIC3.68□□□□□ -1.82
COL15A1P39059 SNORD109B-201ENST00000458961 67 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms