Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL117339.3-201ENST00000418733 162 ntBASIC4.64□□□□□ -1.67
SOX1O00570 AL157831.1-201ENST00000426134 473 ntBASIC4.64□□□□□ -1.67
SOX1O00570 TOMM20P4-201ENST00000427861 435 ntBASIC4.64□□□□□ -1.67
SOX1O00570 BX510359.1-201ENST00000456973 237 ntBASIC4.64□□□□□ -1.67
SOX1O00570 RPL21P13-201ENST00000488305 481 ntBASIC4.64□□□□□ -1.67
SOX1O00570 FTH1P11-201ENST00000517577 551 ntBASIC4.64□□□□□ -1.67
SOX1O00570 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX1O00570 SYF2P1-201ENST00000550658 413 ntBASIC4.64□□□□□ -1.67
SOX1O00570 AC103996.1-201ENST00000555468 102 ntBASIC4.64□□□□□ -1.67
SOX1O00570 AC006349.1-201ENST00000555526 235 ntBASIC4.64□□□□□ -1.67
SOX1O00570 MIR4300-201ENST00000581016 96 ntBASIC4.64□□□□□ -1.67
SOX1O00570 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX1O00570 PCAT14-202ENST00000627127 3935 ntBASIC4.64□□□□□ -1.67
SOX1O00570 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SOX1O00570 AP001148.1-201ENST00000624124 2359 ntBASIC4.64□□□□□ -1.67
SOX1O00570 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SOX1O00570 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX1O00570 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX1O00570 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SOX1O00570 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX1O00570 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX1O00570 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SOX1O00570 AC004817.4-201ENST00000602396 3625 ntBASIC4.64□□□□□ -1.67
SOX1O00570 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX1O00570 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SOX1O00570 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX1O00570 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX1O00570 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX1O00570 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RNU6-774P-201ENST00000363238 107 ntBASIC4.63□□□□□ -1.67
SOX1O00570 Y_RNA.269-201ENST00000364685 89 ntBASIC4.63□□□□□ -1.67
SOX1O00570 Y_RNA.358-201ENST00000365491 99 ntBASIC4.63□□□□□ -1.67
SOX1O00570 MIR128-1-201ENST00000384921 82 ntBASIC4.63□□□□□ -1.67
SOX1O00570 SNORA12.2-201ENST00000391040 156 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL21P75-201ENST00000396599 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL21P28-201ENST00000401418 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AL590556.1-201ENST00000423231 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL23AP22-201ENST00000437556 453 ntBASIC4.63□□□□□ -1.67
SOX1O00570 HIGD1AP2-201ENST00000446367 280 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC012671.1-201ENST00000451912 203 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC079354.2-201ENST00000453523 154 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AL136097.1-201ENST00000456945 913 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL21P11-201ENST00000461458 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL21P39-201ENST00000463605 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC132942.1-201ENST00000486753 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC093591.1-201ENST00000491435 481 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RPL21P16-201ENST00000495531 483 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AL359273.1-201ENST00000510918 627 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RNU6-612P-201ENST00000516909 102 ntBASIC4.63□□□□□ -1.67
SOX1O00570 RN7SKP57-201ENST00000517248 293 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX1O00570 AC007458.1-201ENST00000542812 373 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX1O00570 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX1O00570 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX1O00570 AC104581.2-201ENST00000572227 430 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AC136932.1-201ENST00000574771 208 ntBASIC4.63□□□□□ -1.67
SOX1O00570 MIR3910-1-201ENST00000580936 111 ntBASIC4.63□□□□□ -1.67
SOX1O00570 FAM27D1-201ENST00000612308 341 ntBASIC4.63□□□□□ -1.67
SOX1O00570 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX1O00570 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SOX1O00570 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX1O00570 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.62□□□□□ -1.67
SOX1O00570 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX1O00570 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SOX1O00570 RNU6-378P-201ENST00000384324 107 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RNY3P4-201ENST00000384428 101 ntBASIC4.62□□□□□ -1.67
SOX1O00570 MIR514A1-201ENST00000385133 98 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RN7SKP156-201ENST00000410308 342 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.62□□□□□ -1.67
SOX1O00570 MTATP6P29-201ENST00000415057 132 ntBASIC4.62□□□□□ -1.67
SOX1O00570 TMEM167AP1-201ENST00000423409 219 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 AL627311.1-201ENST00000431514 115 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL589765.3-201ENST00000446084 462 ntBASIC4.62□□□□□ -1.67
SOX1O00570 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.62□□□□□ -1.67
SOX1O00570 RN7SL429P-201ENST00000479090 223 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RN7SL293P-201ENST00000481765 281 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RN7SL489P-201ENST00000486185 223 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RN7SL327P-201ENST00000488659 223 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL049874.1-201ENST00000489560 388 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AK3P2-201ENST00000507976 429 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RNA5SP230-201ENST00000517039 122 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RNU4-60P-201ENST00000517239 135 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AP002770.2-201ENST00000543613 532 ntBASIC4.62□□□□□ -1.67
SOX1O00570 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.62□□□□□ -1.67
SOX1O00570 AC005255.1-201ENST00000593748 216 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AC006272.2-201ENST00000594725 163 ntBASIC4.62□□□□□ -1.67
SOX1O00570 Y_RNA.772-201ENST00000606692 102 ntBASIC4.62□□□□□ -1.67
SOX1O00570 RN7SL853P-201ENST00000617250 223 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AL360181.4-201ENST00000621752 134 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AC140113.4-201ENST00000622087 222 ntBASIC4.62□□□□□ -1.67
SOX1O00570 AC138965.3-201ENST00000623875 498 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms