Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 AP003041.3-201ENST00000527151 707 ntBASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 AC010653.2-201ENST00000623505 997 ntBASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 KRT18P22-201ENST00000402024 1347 ntBASIC17.72■□□□□ 0.43
CLDN16Q9Y5I7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 CCR12P-201ENST00000446203 998 ntBASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 AC073508.3-201ENST00000619697 1419 ntBASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN16Q9Y5I7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN16Q9Y5I7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN16Q9Y5I7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN16Q9Y5I7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 AC128688.1-201ENST00000487626 519 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 AL512353.2-201ENST00000448759 1962 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN16Q9Y5I7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN16Q9Y5I7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms