Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 AC004980.1-204ENST00000429707 299 ntBASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 LINC01465-201ENST00000408887 1940 ntBASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 AC073508.3-201ENST00000619697 1419 ntBASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 EGLN1P1-201ENST00000531623 762 ntBASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 LINC01238-205ENST00000567549 1107 ntBASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 AP005242.2-201ENST00000580065 1175 ntBASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB11Q9Y5F2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB11Q9Y5F2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 AC104076.2-201ENST00000448912 469 ntBASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB11Q9Y5F2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms