Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 MCCD1P1-208ENST00000445732 328 ntBASIC19.89■□□□□ 0.77
YIPF1Q9Y548 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 KRT8P3-201ENST00000519669 1449 ntBASIC19.89■□□□□ 0.77
YIPF1Q9Y548 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 HYMAI.1-201ENST00000620949 238 ntBASIC19.89■□□□□ 0.77
YIPF1Q9Y548 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
YIPF1Q9Y548 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 VENTXP5-201ENST00000523979 775 ntBASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.88■□□□□ 0.77
YIPF1Q9Y548 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 TEX21P-204ENST00000641479 1693 ntBASIC19.87■□□□□ 0.77
YIPF1Q9Y548 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 AL136038.3-201ENST00000561909 1096 ntBASIC19.87■□□□□ 0.77
YIPF1Q9Y548 MIR3180-5-201ENST00000583743 153 ntBASIC19.87■□□□□ 0.77
YIPF1Q9Y548 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.87■□□□□ 0.77
YIPF1Q9Y548 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 LINC01311-201ENST00000565162 1445 ntBASIC19.86■□□□□ 0.77
YIPF1Q9Y548 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
YIPF1Q9Y548 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms