Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HCC1Q9Y3T6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 AC067852.2-201ENST00000590513 2313 ntBASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 PNMA6B-201ENST00000538162 1200 ntBASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 DPP3P2-201ENST00000416030 1696 ntBASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 AC090164.3-201ENST00000610780 2143 ntBASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HCC1Q9Y3T6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.7■■□□□ 1.06
R3HCC1Q9Y3T6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms