Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 AC124283.5-201ENST00000624661 1809 ntBASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 RAP2CP1-201ENST00000605103 478 ntBASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBE2D4Q9Y2X8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 AC068880.1-201ENST00000507289 2297 ntBASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 ABALON-201ENST00000629058 1903 ntBASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
UBE2D4Q9Y2X8 RPS2P52-201ENST00000469610 820 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms