Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 KRT8P3-201ENST00000519669 1449 ntBASIC24.86■■□□□ 1.57
SPG7Q9UQ90 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.86■■□□□ 1.57
SPG7Q9UQ90 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 AC012313.10-201ENST00000623509 926 ntBASIC24.86■■□□□ 1.57
SPG7Q9UQ90 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG7Q9UQ90 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 AC026396.1-201ENST00000419388 421 ntBASIC24.85■■□□□ 1.57
SPG7Q9UQ90 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 AC092119.3-201ENST00000612618 583 ntBASIC24.85■■□□□ 1.57
SPG7Q9UQ90 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
SPG7Q9UQ90 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 AL691432.3-201ENST00000621860 400 ntBASIC24.84■■□□□ 1.57
SPG7Q9UQ90 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPG7Q9UQ90 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 SEC1P-202ENST00000473944 940 ntBASIC24.83■■□□□ 1.57
SPG7Q9UQ90 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
SPG7Q9UQ90 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms