Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 PWWP2AP1-201ENST00000429776 2273 ntBASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 AC112907.3-201ENST00000577781 2400 ntBASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 AC006538.3-201ENST00000612495 578 ntBASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 AL157888.1-201ENST00000631930 593 ntBASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.33■■■□□ 2.13
SHANK2Q9UPX8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 RCC2P3-201ENST00000418112 1537 ntBASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC28.32■■■□□ 2.12
SHANK2Q9UPX8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC28.31■■■□□ 2.12
SHANK2Q9UPX8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 AC112497.1-201ENST00000624824 639 ntBASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 KATNBL1P6-202ENST00000562413 1466 ntBASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SHANK2Q9UPX8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 AL512353.2-201ENST00000448759 1962 ntBASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 MIR3180-1-201ENST00000580374 94 ntBASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 MIR3180-3-201ENST00000584616 94 ntBASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 AL136038.4-201ENST00000603606 1261 ntBASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 AC004263.2-201ENST00000617183 678 ntBASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SHANK2Q9UPX8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SHANK2Q9UPX8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SHANK2Q9UPX8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC28.27■■■□□ 2.12
SHANK2Q9UPX8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SHANK2Q9UPX8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SHANK2Q9UPX8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms