Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 AC099398.1-201ENST00000567919 2776 ntBASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COMMD3Q9UBI1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AC008764.6-201ENST00000595909 2069 ntBASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 EDA-201ENST00000338901 1233 ntBASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AC091305.1-201ENST00000479476 895 ntBASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 AF213884.3-201ENST00000563833 479 ntBASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COMMD3Q9UBI1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 MIR939-201ENST00000401314 82 ntBASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COMMD3Q9UBI1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms