Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 TSPY21P-201ENST00000433481 731 ntBASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3BQ9UBC3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3BQ9UBC3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CLEC4GP1-201ENST00000596555 870 ntBASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DNMT3BQ9UBC3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 HBZP1-201ENST00000354915 429 ntBASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.84■□□□□ 0.77
DNMT3BQ9UBC3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms