Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 NPAP1P7-201ENST00000613027 823 ntBASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCFC1R1Q9NWW0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HCFC1R1Q9NWW0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HCFC1R1Q9NWW0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.77■□□□□ 0.75
HCFC1R1Q9NWW0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HCFC1R1Q9NWW0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCFC1R1Q9NWW0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 MCCD1P1-208ENST00000445732 328 ntBASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HCFC1R1Q9NWW0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 AC026396.1-201ENST00000419388 421 ntBASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 MIR3180-5-201ENST00000583743 153 ntBASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.74■□□□□ 0.75
HCFC1R1Q9NWW0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1R1Q9NWW0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1R1Q9NWW0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1R1Q9NWW0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1R1Q9NWW0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCFC1R1Q9NWW0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms