Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 TNRC18P3-201ENST00000441896 2691 ntBASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC3Q9NUV7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC3Q9NUV7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 AC116351.2-201ENST00000606540 1585 ntBASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.95■□□□□ 0.94
SPTLC3Q9NUV7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SPTLC3Q9NUV7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 GPX1P1-201ENST00000388829 606 ntBASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 AC004911.1-201ENST00000416316 871 ntBASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 AC005181.1-201ENST00000604782 1256 ntBASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPTLC3Q9NUV7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms