Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AC116562.2-201ENST00000507042 360 ntBASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KLHL1Q9NR64 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AC010331.1-201ENST00000611423 582 ntBASIC17.9■□□□□ 0.46
KLHL1Q9NR64 AL445675.2-201ENST00000620291 557 ntBASIC17.9■□□□□ 0.46
KLHL1Q9NR64 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.9■□□□□ 0.46
KLHL1Q9NR64 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
KLHL1Q9NR64 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KLHL1Q9NR64 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KLHL1Q9NR64 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 RCN1P1-201ENST00000400413 996 ntBASIC17.89■□□□□ 0.45
KLHL1Q9NR64 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.89■□□□□ 0.45
KLHL1Q9NR64 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.89■□□□□ 0.45
KLHL1Q9NR64 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.89■□□□□ 0.45
KLHL1Q9NR64 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms