Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 AC026366.1-201ENST00000488803 879 ntBASIC17.19■□□□□ 0.34
HINT3Q9NQE9 AP003097.1-201ENST00000530657 1135 ntBASIC17.19■□□□□ 0.34
HINT3Q9NQE9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HINT3Q9NQE9 BICD1-207ENST00000551848 1962 ntBASIC17.19■□□□□ 0.34
HINT3Q9NQE9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 UNC93B4-201ENST00000505679 747 ntBASIC17.18■□□□□ 0.34
HINT3Q9NQE9 KRT18P16-201ENST00000510337 1294 ntBASIC17.18■□□□□ 0.34
HINT3Q9NQE9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 SOX15-203ENST00000570788 1093 ntBASIC17.18■□□□□ 0.34
HINT3Q9NQE9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 TMEM191A-211ENST00000637163 1067 ntBASIC17.18■□□□□ 0.34
HINT3Q9NQE9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
HINT3Q9NQE9 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.17■□□□□ 0.34
HINT3Q9NQE9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 AC005332.8-201ENST00000622750 2735 ntBASIC17.17■□□□□ 0.34
HINT3Q9NQE9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HINT3Q9NQE9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms