Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 MIPEPP3-201ENST00000412105 444 ntBASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 AL512625.2-201ENST00000417533 625 ntBASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARFGAP3Q9NP61 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.33■□□□□ 0.84
ARFGAP3Q9NP61 KRT17P1-201ENST00000399211 1546 ntBASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 HTR7P1-202ENST00000624664 4411 ntBASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 TEX21P-204ENST00000641479 1693 ntBASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ARFGAP3Q9NP61 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 CYP21A1P-202ENST00000354927 1481 ntBASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 BCL2-203ENST00000589955 5011 ntBASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 ABALON-201ENST00000629058 1903 ntBASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ARFGAP3Q9NP61 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 KRT16P6-202ENST00000425692 1426 ntBASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 AL512353.2-201ENST00000448759 1962 ntBASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARFGAP3Q9NP61 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms