Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 RCN1P1-201ENST00000400413 996 ntBASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 AC113347.1-201ENST00000413321 391 ntBASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 CA15P1-201ENST00000481698 905 ntBASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF304Q9HCX3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 AC005521.1-201ENST00000393351 872 ntBASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 AL137013.1-201ENST00000432946 1228 ntBASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TSPY21P-201ENST00000433481 731 ntBASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TSPY17P-201ENST00000450329 467 ntBASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF304Q9HCX3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 INGX-201ENST00000359239 846 ntBASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 LIN28AP1-201ENST00000429574 405 ntBASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF304Q9HCX3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 AC092865.7-201ENST00000641832 219 ntBASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF304Q9HCX3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms