Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 AC007225.1-201ENST00000566331 1836 ntBASIC19.96■□□□□ 0.79
CD248Q9HCU0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
CD248Q9HCU0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 DPP3P2-201ENST00000416030 1696 ntBASIC19.95■□□□□ 0.78
CD248Q9HCU0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 MIR1238-201ENST00000408483 83 ntBASIC19.95■□□□□ 0.78
CD248Q9HCU0 TMPOP1-202ENST00000424642 1267 ntBASIC19.95■□□□□ 0.78
CD248Q9HCU0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 AC010947.1-201ENST00000623454 693 ntBASIC19.95■□□□□ 0.78
CD248Q9HCU0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CD248Q9HCU0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD248Q9HCU0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 AL390955.1-201ENST00000428694 934 ntBASIC19.94■□□□□ 0.78
CD248Q9HCU0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CD248Q9HCU0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD248Q9HCU0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 AP006587.1-201ENST00000534129 1502 ntBASIC19.93■□□□□ 0.78
CD248Q9HCU0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD248Q9HCU0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.93■□□□□ 0.78
CD248Q9HCU0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.93■□□□□ 0.78
CD248Q9HCU0 AL445675.2-201ENST00000620291 557 ntBASIC19.93■□□□□ 0.78
CD248Q9HCU0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.93■□□□□ 0.78
CD248Q9HCU0 AC092865.7-201ENST00000641832 219 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms