Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC090616.6-201ENST00000582640 721 ntBASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 AL671883.3-201ENST00000603274 991 ntBASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 AC104417.2-201ENST00000562989 1793 ntBASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 AL590627.1-203ENST00000421194 1026 ntBASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZFYVE28Q9HCC9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 Z83836.1-201ENST00000624605 1642 ntBASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 IGHV3-41-201ENST00000613121 348 ntBASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.74■■□□□ 1.07
ZFYVE28Q9HCC9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.73■■□□□ 1.07
ZFYVE28Q9HCC9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 AP005212.1-201ENST00000581547 1997 ntBASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 KRT18P13-201ENST00000400056 1290 ntBASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 PMS2P1-201ENST00000431037 1228 ntBASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 AC099336.1-202ENST00000602961 463 ntBASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZFYVE28Q9HCC9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms