Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 TEX21P-204ENST00000641479 1693 ntBASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SND1-IT1Q9HBX3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 KRT18P68-201ENST00000392293 1000 ntBASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 KRT18P61-201ENST00000585825 1298 ntBASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SND1-IT1Q9HBX3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RARRES2P4-201ENST00000514074 484 ntBASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SND1-IT1Q9HBX3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SND1-IT1Q9HBX3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms