Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VCX3BQ9H321 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VCX3BQ9H321 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VCX3BQ9H321 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 AC097381.1-201ENST00000429019 1296 ntBASIC18.13■□□□□ 0.49
VCX3BQ9H321 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.13■□□□□ 0.49
VCX3BQ9H321 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.13■□□□□ 0.49
VCX3BQ9H321 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VCX3BQ9H321 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 AC084018.2-201ENST00000613093 2607 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 KRT16P3-201ENST00000439127 1283 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 AC138907.5-202ENST00000569484 235 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 MIR3621-201ENST00000580529 85 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 AC126544.1-201ENST00000580842 1059 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.12■□□□□ 0.49
VCX3BQ9H321 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCX3BQ9H321 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.12■□□□□ 0.49
VCX3BQ9H321 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 AC126763.1-201ENST00000552015 2118 ntBASIC18.11■□□□□ 0.49
VCX3BQ9H321 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCX3BQ9H321 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
VCX3BQ9H321 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCX3BQ9H321 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.1■□□□□ 0.49
VCX3BQ9H321 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms