Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TCF3P1-201ENST00000423021 1937 ntBASIC21.07■□□□□ 0.96
RNF39Q9H2S5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF39Q9H2S5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 INGX-201ENST00000359239 846 ntBASIC21.06■□□□□ 0.96
RNF39Q9H2S5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC005521.1-201ENST00000393351 872 ntBASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AC005363.2-201ENST00000618631 242 ntBASIC21.06■□□□□ 0.96
RNF39Q9H2S5 AP000770.2-201ENST00000623694 100 ntBASIC21.06■□□□□ 0.96
RNF39Q9H2S5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF39Q9H2S5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 TMPOP1-202ENST00000424642 1267 ntBASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 IL22-202ENST00000538666 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AL160286.2-201ENST00000567150 934 ntBASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AC012557.2-201ENST00000605919 418 ntBASIC21.05■□□□□ 0.96
RNF39Q9H2S5 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF39Q9H2S5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AC080188.3-201ENST00000624842 748 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AL138960.2-201ENST00000625145 535 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AC136428.4-201ENST00000634254 1155 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 AC068137.4-201ENST00000638485 296 ntBASIC21.04■□□□□ 0.96
RNF39Q9H2S5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF39Q9H2S5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms